| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI00630 |
|---|
| Symbol | |
|---|
| ID | 3259503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006694 |
|---|
| Strand | - |
|---|
| Start bp | 151613 |
|---|
| End bp | 152622 |
|---|
| Gene Length | 1010 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | |
|---|
| GC content | 54% |
|---|
| IMG OID | 638258547 |
|---|
| Product | U1 small nuclear ribonucleoprotein, putative |
|---|
| Protein accession | XP_572762 |
|---|
| Protein GI | 58271212 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG5136] U1 snRNP-specific protein C |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAAAAGCATC GCTCAAGATG GGGAAATACT ACTGCGACTA CTGCGATATG TGCGTTCTCC
TTTTCCTTAT CCCGGACACA AGCTGACAAT CCTCGTAGCT ACCTCACCCA CGACTCTATG
AACGCCCGCA AAGCACACAA TTCGGGTCGT AATCATGTCG CCAATGTTCG AGACTACTTT
GCCGGCCTGG GAGGGAACCA AGCGCAGAGT CTGATTGACC AAATTATCCA ACAGCACGAA
AGCGGGGGTA GAAATCAGAT GATGATGGCG CCGAGTATGC GGTTGGGTGC GGGGTTCATG
AATCCCCTGG CTACTCAGCC TGGTACGTTT CAATAATCCT CCCTCTTTAA AATTCGTCCA
TAGCCAAGGC TAACCATGAC AACATTTTAG GCTACCCCGG CCCCCCTCCT CCCGGAGCAT
TCCCCACTTT CCCCCCTACA GCCGGTACAC CCCCCTTCCG TCCTCCTTTC CCCCCATCCT
CAGCACCCGG TGCTCCTCCC CCTACCATGC CGCCTTTCCT CCCTCCCAAC GCTTCTGCCG
GTGCCGCACC CGGTATCGGT ATGGGGAGCA CGCCCCCTTT CCCACCTAAC ACCGCGTCAC
CGAACCCCGG TATGCCGCCG TTTAGACCAC CGATGGGGAT GGGGATGCCT CCTGCTCCTG
CTCAGGCACA AGCACAAGGA TCACCGATGG GGATGCCACA GCAGGGACAA CAAGGGACGT
TCACACCCAC GCAAGAGGTT CCTCAAGGTG CTGGGGCGGG AATACATCCT GATCGATTGA
GGATGTTGGG ACAATAGGCG GGGTGGTGAT GGTGTGTGTG TGCAAACAAG GAAAGAGATT
AGACGGCAGA TGGGAAGGAT CAGGTTAGGC CGAGATTAAG GCAATGTATC ATCCGTTATA
TACCTGCATA CCAACCGAGT TTTTGGGCCT CGCATTCAGA AGTGTGAAAT TGTTGACGGT
GTAGATATTT TAACTAGACC AAGAGACTAT GTAGACACAC AAAAAATTCG
|
|---|
| Protein sequence | MGKYYCDYCD IYLTHDSMNA RKAHNSGRNH VANVRDYFAG LGGNQAQSLI DQIIQQHESG
GRNQMMMAPS MRLGAGFMNP LATQPGYPGP PPPGAFPTFP PTAGTPPFRP PFPPSSAPGA
PPPTMPPFLP PNASAGAAPG IGMGSTPPFP PNTASPNPGM PPFRPPMGMG MPPAPAQAQA
QGSPMGMPQQ GQQGTFTPTQ EVPQGAGAGI HPDRLRMLGQ
|
|---|
| |