Gene CNI00580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI00580 
Symbol 
ID3259604 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp138174 
End bp139265 
Gene Length1092 bp 
Protein Length288 aa 
Translation table 
GC content53% 
IMG OID638258542 
Productclathrin light chain, putative 
Protein accessionXP_572797 
Protein GI58271282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.711726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACG ACCCCATGGC AGACTTCCTC GCGCGGGAAA AGGCAGCCCT CGGCGACGAT 
GCCGACTTCT TTGCCAACCC CACTCCCTCC GCTGCCTCAG GCATAGACGC ATTCCCGGAC
CTCAGTGTGT CACCCCGTAC CGTCCTTCGC GCTTACACTG ACACTCTATA GCATCCCCGG
CCGTTGAACC CGAGTCTACA CCTGTCAAGC CGCCTACGCC CCAGTATCAA GGTATTGATG
CGTTTCCCGA CATTGATACT CCCGCTGTAG ACGGTACACA AATCAAGGTG ACTGGTCCGG
CTGGTACTGG GGAAGATGAG GATGTCATGA AGTTTGAGAG TGCTTTCCCT GATCTGTCTG
GGGAGACTGG TTCCCAACCA GCTTCTAAAC CCATATTTAA TGCCCTCTCT CCTCAGCCGT
ATGGCGCATC GCCATACCCA CCCACTGCTA CCACTGCCGT TTCCCGATCC CCCCACCCCT
CCATCCTCCC CGCTCCTACT TTCAACAACA TCCTTCCTAC CGCCGATGAA GACACTGAGC
CTATCAAGGC CTGGAAAGCT CGTCAAGCCG AAGAGATTCA AAAGCGTGAC GAAGCGGATA
AGAAGAGGAG GGACGAAATG AGTGATAGGG CTGAAAAGGC GATTGACCAG TTCTATGAGG
AATACAACAA GATGAAGGAG AAAAATATCC GAGAGAACAA GTAGGTCGCC TCTTTCTTTC
TTGACGCGAT GGATAACTAA TAAAAGCTGT AAACCTTTAG GGAGAGCGAA GCCGAGTTCC
TCGAAAAGCT TCAAGAGGGT GTCGCCAAGG GAACAGCATG GGAACGTATC TCTGACCTCA
TCTCGCTCGA AAACTCTCGT ACGTACCTTA TCCATTTTAT TCAACCACAA TATCACCCCA
TATCTCGAGT ACTCAAACTG ACAATGTCAC CGGACCCGCC TCTCCTTCTA CTCGCAATCG
TAATCTCGAA ATACAGAATC TAAAACCATT CGCCCCTCCG TCCCTGGCGG CTCTGACCTT
GCGCGCATGA AGGAGATCCT CCTCGCCCTC AGGAGGGAAG GTGACAAGGC GCCCGGCGCT
GCCGGTTTTT AG
 
Protein sequence
MSDDPMADFL AREKAALGDD ADFFANPTPS AASGIDAFPD LTSPAVEPES TPVKPPTPQY 
QGIDAFPDID TPAVDGTQIK VTGPAGTGED EDVMKFESAF PDLSGETGSQ PASKPIFNAL
SPQPYGASPY PPTATTAVSR SPHPSILPAP TFNNILPTAD EDTEPIKAWK ARQAEEIQKR
DEADKKRRDE MSDRAEKAID QFYEEYNKMK EKNIRENKES EAEFLEKLQE GVAKGTAWER
ISDLISLENS QSKTIRPSVP GGSDLARMKE ILLALRREGD KAPGAAGF