Gene CNI00340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNI00340 
Symbol 
ID3259420 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006694 
Strand
Start bp81883 
End bp82702 
Gene Length820 bp 
Protein Length189 aa 
Translation table 
GC content47% 
IMG OID638258518 
Productoxidoreductase, putative 
Protein accessionXP_572765 
Protein GI58271218 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGATTGC AAGCAAAATC ACTGAAGAGC GCCCCCCCGA TTGACGTCCT CATTAACAAT 
GTAAGTTTTA AGAGAATTTG TCATCATGTC GCTCTTCATT GACGTCAGTT ACACAGGTAA
GCTTTGCAGT CGCTGCCAAT GCACCCTTTT GGGAGCAAGA CCTTGACAAT GTGGCTTCGG
TGATGGATGT AAACCTGAGC GGGGCTTATG ACTATTACTC GTAGGTGGAT CTTTCACTTG
TCTTGAGTTG TGTCCCTTTT CTAACAAGAT GTTATAGATG CTGTGCTTAA ATACAGCATG
ATGCAACGCA AGCCTCGCCC CACGGGGACT ATCCTCAATA TCTCGAGCAT CACTGGTCAT
CAAGCCCATG TTCGAGAATT TTTTGAAGCT TCTTATCATA CTTTCAAGGT TGGTGACAAG
GCATGCATTT ATCTTACTAG GGGGTGATTA CCGAGTTCAT TTTCACGCCG ACTTTATGGT
AAACTAGGCT GGGGTTGAGG GCTTCACAAA CGTATTGCGT CACGAATTGG TAGGCACAAA
CATTCGCGTG CTTCTCAACA GGCCCGGGAC AACAAGAACA GAGTTCCATG CTCGTCGACA
TGGATATGAC AGGGAAAAGA CTGATGCCAC CTATTCTGGT TCCTGTCCGT TGGTTGCGGA
TGATATCGCC GTCAGCTGTT TATACCAATG CCTTCAGCCT GAGAGAATAT CAGTCGTGCT
GCTGGAGACA CTTGGAACGG CGCAGAGGAG TTTGTACTCC GTTGATCAGG AGTATGAATC
GAGAAATGGG CAATCTGAAT GTCGGAAATG GTCAGAATAA
 
Protein sequence
MRLQAKSLKS APPIDVLINN VSFAVAANAP FWEQDLDNVA SVMDVNLSGA YDYYSMMQRK 
PRPTGTILNI SSITGHQAHA GVEGFTNVLR HELVGTNIRV LLNRPGTTRT EFHARRHGYD
REKTDATYSG SCPLVADDIA VSCLYQCLQP ERISVVLLET LGTAQRSLYS VDQEYESRNG
QSECRKWSE