Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNI00340 |
Symbol | |
ID | 3259420 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006694 |
Strand | + |
Start bp | 81883 |
End bp | 82702 |
Gene Length | 820 bp |
Protein Length | 189 aa |
Translation table | |
GC content | 47% |
IMG OID | 638258518 |
Product | oxidoreductase, putative |
Protein accession | XP_572765 |
Protein GI | 58271218 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTGC AAGCAAAATC ACTGAAGAGC GCCCCCCCGA TTGACGTCCT CATTAACAAT GTAAGTTTTA AGAGAATTTG TCATCATGTC GCTCTTCATT GACGTCAGTT ACACAGGTAA GCTTTGCAGT CGCTGCCAAT GCACCCTTTT GGGAGCAAGA CCTTGACAAT GTGGCTTCGG TGATGGATGT AAACCTGAGC GGGGCTTATG ACTATTACTC GTAGGTGGAT CTTTCACTTG TCTTGAGTTG TGTCCCTTTT CTAACAAGAT GTTATAGATG CTGTGCTTAA ATACAGCATG ATGCAACGCA AGCCTCGCCC CACGGGGACT ATCCTCAATA TCTCGAGCAT CACTGGTCAT CAAGCCCATG TTCGAGAATT TTTTGAAGCT TCTTATCATA CTTTCAAGGT TGGTGACAAG GCATGCATTT ATCTTACTAG GGGGTGATTA CCGAGTTCAT TTTCACGCCG ACTTTATGGT AAACTAGGCT GGGGTTGAGG GCTTCACAAA CGTATTGCGT CACGAATTGG TAGGCACAAA CATTCGCGTG CTTCTCAACA GGCCCGGGAC AACAAGAACA GAGTTCCATG CTCGTCGACA TGGATATGAC AGGGAAAAGA CTGATGCCAC CTATTCTGGT TCCTGTCCGT TGGTTGCGGA TGATATCGCC GTCAGCTGTT TATACCAATG CCTTCAGCCT GAGAGAATAT CAGTCGTGCT GCTGGAGACA CTTGGAACGG CGCAGAGGAG TTTGTACTCC GTTGATCAGG AGTATGAATC GAGAAATGGG CAATCTGAAT GTCGGAAATG GTCAGAATAA
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Protein sequence | MRLQAKSLKS APPIDVLINN VSFAVAANAP FWEQDLDNVA SVMDVNLSGA YDYYSMMQRK PRPTGTILNI SSITGHQAHA GVEGFTNVLR HELVGTNIRV LLNRPGTTRT EFHARRHGYD REKTDATYSG SCPLVADDIA VSCLYQCLQP ERISVVLLET LGTAQRSLYS VDQEYESRNG QSECRKWSE
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