| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNI00050 |
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| Symbol | |
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| ID | 3259794 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006694 |
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| Strand | + |
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| Start bp | 14423 |
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| End bp | 17369 |
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| Gene Length | 2947 bp |
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| Protein Length | 725 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | 638258489 |
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| Product | tRNA dihydrouridine synthase, putative |
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| Protein accession | XP_572750 |
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| Protein GI | 58271188 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTATACACCA TGACAGACGA CCCCGCAGCC ACACCTCGTC CAGAGACTTC TGTCAACGCA
AGGCCAGCAT TTTCCGGTCA GGCTCCGATC AAAGCCGAGT ACGTCGGATC TCGTCGCAAA
CCGTACCTCA AACTAACCAA AATTCATTCT TTAGATATCT AATCAACACC ACCCCTATCG
TCGAATCTGC CTCTGCCTCA GAGCTCAACA ACATTCACCC CGATGATGCC GCCGAGGGTC
GTACCGATTC CCGTGACTCC CGCGATGGTC GTGACAGACC CGACAACAAA CGGCGTAAAC
CCAACAAGCA AGACAAAAAA GACAAAAAAG GTCAAAATAA GGGCCGCCAC TTCCCCGTCA
TCCGGGAAGC CTCTGTCCGT ATCTGTCGTG CTTGGGAAAC AACAGGTATC TGTGACCGTG
CAGATAAGGG TGATTGCCGA TATGCTCACA GCTGGGAAGG TTACTTTGAG GTGAAACCGA
ATGATATCAG TTACCGTCCT GATTGGTCCT TGGTCGGTGA GGCGCCGTTT GTGGTGGAAG
GGGAAAGGGT GGTGGGCGGT GAGGATGTGG TGGGGAAGAC GCTTGACTTA GATACGGTTT
GCCCGGTGTT GAAGGACTTG GGGTACTGTC CTTTTGGGTG GCGATGTCGG TTCTTGGGTG
CGCACGTTAA GCGTGTGGCT GCTGCTGTAG ACGGGGAGAA GGAAAAGGAG GCGGGCCCTG
AGAAGCGAAT GGGAGAGTGG CAAGTCGAGA ACTGGGTACA AAGCGAAGTG GAGAACGGGT
GGAAACAAAA GGAGACGAAT TGGCCTGAAC ATGAAGTGCT TAACGCTCTT CGCCGTAGTA
CTGTAAGTCC AACTCTACCG GTCCTCCCCA TTCCGCTTGA CATATCTCTC CGACATACGT
TTGGCAGTCA AGGCAAATTA CTGTGCTGAT GAAGTTTCAC AGGCGTCATT CCCGTTCTCT
GAAGCATACC TCAAGAAAGT TGATCCCGAC AAACCTTTTA CCCTTCAAAA CAAGAAACCC
ACCAAACAAC AGCCACACAA ACGCAAAAAC AATGTTCTCG ACGAAGAAGA AGCTGCAAAT
GGACCAACCG GCATTCCCTC CGCTGGGGAT GATGAGGAGA ACGCTATGAA CGCCACAGAA
AACGAACGGA ATGAGGAGAA GGGTAAAGTG TACGGTGAAC CGGAAGCGAT TGACGTGCCA
CTCAGACCAG AGGAGAAGAG GAGGTTAAAC TGGGAAGGTG GAAGATATCT CGCTCCTCTG
ACAACCGTCG GTAATCTTGT AGGTCTCCCT TTCCCTTCTC CTCATTCCTC CTTCTCCTTT
CCCGCTCCGC CCAAACTAAC TTCCTCCCCT TCCAGCCATT CCGCCGCCTC TGTGTTGACT
ACGGCGCCAC CATCACCGTC TCCGAAATGG CTCTCGCCCA ACCCCTCGTC TACGGCGCTA
AAGAAGAATG GGCTCTCGTC CGTCGACACG AGAGCGAAAA GATGTTTGGT GTCCAAGTCG
CCGGTGGGTT CCCGAACCGG ATGGTACCCG CCGCGGAAGT CATTGCGAAT ACTATAGGAA
AGGGTGGGGG GGTGGATTTT GTGGATGTTA ATATGGGTTG CCCGATTGAT TTGGTCTTCA
ACCAAGGTGC GGGTAGCGCC CGTAAGTTTT TTTTCTGTTC GGCCCCCTGA GGAAGGCCGC
AAGAAAACTG ATGTTTTTGA TGATCAGTTA TGGACTCCCC TGGACGATTG GGTAAGCTGT
TGGTGGGCAT GAACAGGGCC CTTGGTGATA GTAAGTCACC TCTTTTCTCC TCCATTTGTT
TTGTAATTTG AATGGATAGG CTGACATATC CGTCTTTCTT CGATTTTAGT CCCTCTGACC
GTCAAATTCG TACGTTTTTC CCTTGCTCAA CATCCCAACC TGTCCAGGCA TGTGGATTTG
CATGACTGAC GCAACATTTT CATATAGAGA ACTGGTGTTG CGCATGGGAA ACCTAATGCT
CACAAGTTGA TTCCTCGTTT CGTCACTGAA TGGGGAGCGG GCGCTTTGAC CGTAAGTCCA
CTGTCATCTT CCTTTTTCCC ATACGCCATA CCGAACCCAA CACTGACACT ACAACCCTTC
TGCCCTCCAG ATTCACGGTC GATCTCGCCA ACAACGCTAC TCCAAACCTG CCGACTGGGA
ATACATTAAG ACTTGCGTCA CCGCCCTGCG CGAGTCCGTT GCCGACGCCA ACCTTCCTCC
CGTTCCCATC TTTGGAAACG GTGATTGTTT CTCTGCTGCT TCGTATTATG AGGAGATGGA
CAGAAGTGGG GTGGATGGAG TGATGGTCGC GAGAGGGGCG TTGATCAAGC CATGGATCTT
TACGGAGATC AAGGAAAGAA GAGAGTGGGA TATTTCTGCA GTGGAGAGGT TGGAGGGTAT
CAAAAAGGTG CGCTTTTGTG TCTTTTTCTT CTTCCAAAAT TTTCCATTTG GTCTCGAAGT
ATTGTATAGG GCTATACAAA CTAACCACAT CTACCTTCAC AGTTCGCCGA ATTCGGTCTC
TCCCATTGGG GTTCCGATAC CCAAGGTGTC AATACCACCC GCCGATTCCT ATGCGAAGCC
CTCTCCTTCC AACACCGATA CATCCCCATT GGCCTCCTCG AACGTCTCCC CGCCAAACTC
AACGAACGAC CCCCAGCCTA CAGGGGTAGA AACGAGCTGG AGACGCTTTT GGCGAGTCCG
TTTGCCGGTG ATTGGGTGAA AATTTCAGAG ATGTTTTTGG GCAAGGTGGA TGAAGGGTTT
TCGTTTGTGC CGAAACATAA GAGTAACGCG TATGGAGGGG AAGAGGCGCA GGGCTAAATG
GCGGGTATTG GCATGTTGGG CGTTTTTGTG GGGATTTTTT CTTTTTGTTC AAGGTCATCC
GGTGGGCGAG CTGTCTTGAT TACGCGACCG AATCTAGTTT CTCGCTACTG TATACTTTAC
GTACCGG
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| Protein sequence | MTDDPAATPR PETSVNARPA FSGQAPIKAE YLINTTPIVE SASASELNNI HPDDAAEGRT
DSRDSRDGRD RPDNKRRKPN KQDKKDKKGQ NKGRHFPVIR EASVRICRAW ETTGICDRAD
KGDCRYAHSW EGYFEVKPND ISYRPDWSLV GEAPFVVEGE RVVGGEDVVG KTLDLDTVCP
VLKDLGYCPF GWRCRFLGAH VKRVAAAVDG EKEKEAGPEK RMGEWQVENW VQSEVENGWK
QKETNWPEHE VLNALRRSTA SFPFSEAYLK KVDPDKPFTL QNKKPTKQQP HKRKNNVLDE
EEAANGPTGI PSAGDDEENA MNATENERNE EKGKVYGEPE AIDVPLRPEE KRRLNWEGGR
YLAPLTTVGN LPFRRLCVDY GATITVSEMA LAQPLVYGAK EEWALVRRHE SEKMFGVQVA
GGFPNRMVPA AEVIANTIGK GGGVDFVDVN MGCPIDLVFN QGAGSALMDS PGRLGKLLVG
MNRALGDIPL TVKFRTGVAH GKPNAHKLIP RFVTEWGAGA LTIHGRSRQQ RYSKPADWEY
IKTCVTALRE SVADANLPPV PIFGNGDCFS AASYYEEMDR SGVDGVMVAR GALIKPWIFT
EIKERREWDI SAVERLEGIK KFAEFGLSHW GSDTQGVNTT RRFLCEALSF QHRYIPIGLL
ERLPAKLNER PPAYRGRNEL ETLLASPFAG DWVKISEMFL GKVDEGFSFV PKHKSNAYGG
EEAQG
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