Gene CNH03010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH03010 
Symbol 
ID3259366 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp266481 
End bp268360 
Gene Length1880 bp 
Protein Length384 aa 
Translation table 
GC content49% 
IMG OID638258184 
Productbranched-chain-amino-acid transaminase, putative 
Protein accessionXP_572471 
Protein GI58270630 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACAGCCTTGA ATTTTGATCA CCGAAAATAA ATACCGATCT TCATTTATAC TATCCATCTC 
CTCTTATCTA TAAACAACTC TTCCACCTCA TTACAACACC AGCACCAAAG AGGCCAATAG
CGAAGATGTC CCAGGCTCTT CTTGCATCCA ATCTTGAACT GACACGCCTC CCCGCCGATT
TCACTCCAGC CCCGGGCAAA GAATCACACG GTCGATACAT GCTCACCGTT CCCTGGTCCC
GCCACACCGG ATGGGGTACA CCCAAAATTG GGCCTAGGAA GGATTTGGCG TTTGATCCTC
TGGCAGGCGT TTTGCAGTAC GCTGTGACTT GTTTCGAAGG GATGAAGGTG AGCTGATTCG
ACAATGAACA ACGAGGTGGC GAGGAAGATA CGGAGTACTG ATAGGATATA TAGTGCTATA
AATCTGAGCA AGGCGATTTG AGATTGTTCA GGCCTGAGAT GAACTTTGAC AGACTCAAGC
GTTCTGGTGC CCGTCTCGGT CTTCCTGTAT GTCTCCCACT CCAGCCGCCA TCAAACGCTC
GACTAACACT CTGAACAGCA TGACTGGGAT AACATCGAGC TCCTTTCCCT CTTCTCCTCC
CTCCTTTCCC TCGAGACCCC TATCGTACCC TCCACCGACG GTTCATCTCT ATACATCCGC
CCCACGTTGC TCGAAACTTC CCAATCATTC GGTATCAAAG AAGACGCTCT CGCGGATGAG
GCTTTGTTGT ACGTAGTGAC ATCTTTGAAT CTGGGTCTGG GGCTTTATGG GAGTAGTGAA
AGAGAAGGAA AGGGATTGAA GCTGGATGCC TGTAAGGAGT TTATCAGGGC TTGGCCTGGC
GGGACGGGTA GTTTCAAGCT TGGGGCGAAC TATGGTCAGT CGATTTTCCT TCTTCTCCTC
GATCTCGGTG CCTGTCCCGA GACTTTTGAC TTCTTTTGAT TGATCAGAAC TCTGGCTAAG
CTTCTCACAG GCACAGTAAA CATCTCTAAG AAGAAGGGAT ACGCTATGTC CCTCTGGTTG
CACGGCAAGG AAGATTACAT CTCCGAAGCG GGCGCTATGA ACATGTGGAT TATTAAGCAG
GCTTCTGATG GCTGTACGTT CATTCTCTAC CCTACCTCTC CCCCTTTCCC TTCCCTAGCG
TTCACTCTTT CTCTACTTCA CCTCAACTAG CGCTAACGTT CATTCCTCTG CGCCTTTTTC
CATGTAGACC TCGAATTCAC AACCATGTCC CTTGATAACG GTATCGTCCT ACCTGGCGTC
ACCCGTCAAT CCATTATTGA GCTCGTTGAA GACCATGCTT CCGGAAAAAA GGCTTTCCCA
TTCGCGGAAG GGGACGTGGA GATGCCGAAA AAGATCAGGA TAGTGGAGAG GGATATTAGT
ATGGGGGAGA TTTTGGAGGG ATTGAAGGAT GGTAGTTTGA AAGGGTACGT CTTTTCTCCC
GTTTTGTTTC TCTTTTTGTG CTTTTTCCTA GTTTCTGCGG CCTTCACTCT TTCCTCTCTC
TATATTTATT ATTTTTACCA ATAGCCTTCG CTAATCTCTC TCCCTTGTCC TTTTCGATAC
AGGATGTTCG GCTGCGGTAC CGGCGTCGTC GTCGTATCCA TCGGCGGGAT CACCTATCGA
AACCAAGATT ACACCATCCC TTTCAACCCG CTCGTCAAGT TATTGAGGGA TACGATGACG
GGTATTCAGA GGGGCAGGAT TGATGAGGGC AGAGGATGGA GTTATAAAAT TGAGGGGAGC
GCTTAAAGCC TGAGGCGCGA ATTACGCTTG ATCTGGAGGG GTGGGTACAG GACGAAGGTG
AAGAATATGC TGAGACCCTA GAAGATAGAT GAATAGACAC GGATGAAAGC AATCAACGGA
TGGGCATTGC CCTCACAATT
 
Protein sequence
MSQALLASNL ELTRLPADFT PAPGKESHGR YMLTVPWSRH TGWGTPKIGP RKDLAFDPLA 
GVLQYAVTCF EGMKCYKSEQ GDLRLFRPEM NFDRLKRSGA RLGLPHDWDN IELLSLFSSL
LSLETPIVPS TDGSSLYIRP TLLETSQSFG IKEDALADEA LLYVVTSLNL GLGLYGSSER
EGKGLKLDAC KEFIRAWPGG TGSFKLGANY GTVNISKKKG YAMSLWLHGK EDYISEAGAM
NMWIIKQASD GYLEFTTMSL DNGIVLPGVT RQSIIELVED HASGKKAFPF AEGDVEMPKK
IRIVERDISM GEILEGLKDG SLKGMFGCGT GVVVVSIGGI TYRNQDYTIP FNPLVKLLRD
TMTGIQRGRI DEGRGWSYKI EGSA