Gene CNH02910 details

Gene Information

• Locus tag: CNH02910
• ID: 3258989
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: -
• Start bp: 298763
• End bp: 301015
• Gene Length: 2253 bp
• Protein Length: 538 aa
• GC content: 49%
• IMG OID: 638258194
• Product: malate synthase, putative
• Protein accession: XP_572462
• Protein GI: 58270612
• COG category: [C] Energy production and conversion
• COG ID: [COG2225] Malate synthase
• TIGRFAM ID: [TIGR01344] malate synthase A

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCCGATAGC CTCGAGACAA CAACTGCATA TATAAGACCT GCCTTCCCAG GTTTACCAGT 
GACTCCCACA GCTTTCACTT CCCAGCTCTT TCATCTATCA ATCAGTCTGT TATCAACACT 
TGCACAAACG AGATAACGAT ACAATGTCTC TCCCTCAAGG CATCTACCTC ACTGCTCCCA 
TCCCCAAGGG CGGAGAGCAC ATCCTCTCTA CCGAAGCTCT CGAGTTTCTC GCCTTGCTCC 
ACAGGACATT CAACAAACGA AGGTTGGAGT TGTTAAAAAA CCGTGAAAAG GTACAGGCCG 
AGCTGGACCA AGGCAAGCCC CTCTCCTTCC TCCCAGAGAC CAGGGAGATT AGGGAGAACC 
TTGCTTGGAA CTGTGCCCCT CCCGGTCCAG GACTTGAAGA CCGTCGGTAT GTCCTTTTCT 
TATTCCTATT AGCAGGGGCT GGAACTGAAC AAGGATACAG AGTTGAGATC ACTGGCCCAA 
CTGACAGGAA GATGGTCATC AACGCTTTGA ACTCTGGTGC CAAAACTTTT ATGGCCGACT 
TTGAGGGTGA GTCGCTCGTT GATACTTGGG TGACACTGTT ATACTGACAA ACATTGAGGA 
TAGACTCCAA TTCTCCTACC TGGTCAAACA TGGTTCTCGG ACAGGTCAAC CTTTACGATG 
CTATCCGGTA AGTTTCCTTC TTAATATCGT AAATATTCAA GGAGGGACTT GACCTGGAAT 
AATAGACGAC AAATTGACTT TGAAATCAAT GGCAAGGCTT ACAAGCTCTC CGAGAAGCCG 
GCTGTGCTTT TGGTCCGGTG AGTCATACAT TCTAAAGCCC TCGACTTCTC CGTTAATATT 
TGCAATAAGA CCTCGAGGAT GGCACCTCCC CGAACCCCGT TTGATTATCG ACGGTACTCC 
CATGTCCGGC TCCCTCTTCG ACTTTGGTCT CTACTTTTTC CACAACGCCC GCGAACTCAT 
CTCTCGAGGT TCTGGACCTT ATTTCTACCT CCCCAAGATG GAGCACCACC TCGAAGCGCG 
TCTTTGGAAC GATGCCTTCT GCCTTGCAAC AAGTCATTTA GGTGTGCAGC AGGGTGTAAT 
TAGGGCAACT GTTTTAATCG AGACTTTACC TGCGGCGTTC CAAATGGAAG AGATTTTGTA 
TGAGTTGAAG GAACACTCTG CGGGTTTGAA CTGTGGGCGA TGGGATTATA TCTTCAGTTT 
GTAAGTTGGT TACTGGTTTT TTGTGTCTGC TCTGGAAATG GGAATGATTA CTGATGAGGA 
GTAGCATCAA GAAGCAACGT GCCCACAAGA ACTGTGTCTT CCCTGACCGA TCTGACGTTA 
CCATGACCGT CCCCTTCATG GACGCCTACG TCCGCCTCCT CATCCAAACT TGTCATAAGT 
AAGCGCACAA TTTGCCACTA CCTCCCAATC CCATCCATTC CCTCCTAACC GACAGCTAAC 
CACCGATAAA CAGGCGAAAG GTCGCCGCCA TGGGAGGCAT GTCTGCCCAG ATTCCTATCA 
AGAACGATCC CGCTGCCAAT GAGCGTGCCA TGTCCAAAGT TCGCGCCGAT AAGCTCCGTG 
AAGTCACTGC GGGCCATGAT GGCACATGGG TGGCTCACCC CGCGCTCATC TCCATCGCCC 
TTGAGATCTT TAACCAACAC ATGCCCGGTC CTAACCAGTA CCACATCCGC CGCGAAGACG 
TTACTGTCAC AGACAAGCAG ATTGCCGACC CCTCTGTCCC TGGGAAGATT ACAGAACAAG 
GGTTGAGGGA TAATGTGAGC GCGGCTTTGT CGTATTGTGC GGCGTGGATT AGTGGGAATG 
GCTGTGTGCC GATTAATCAT TTGATGGAGG ACGCTGCGAC GGCGGAGATT GCGAGGGTGC 
AGCTTTGGCA GTGGTGCAAG TATGGCTCCA AGACTGTATG TCTTCCTTAC ATCTTTTTTT 
GTTGTCTGCT CTATGGCTGA ACTCTTCCTT TTTCTTTTTC TGGCAGGACT CCGGCAAAGA 
CATCAATCCT TCTTACGTCC AAACTATTCT CTCTGAAGAA GCATCCAAAG TCTCAAAACT 
GCCTGGTATT GATCCATCAC ACGTCAAGAT TGCGTCCGAG TACATGGCCC AGCAGGTCAA 
GGCCCAGTGG CCGAGTGATT TCTTGACAAG TGATTTGTTG GGGTACCTTG AAGGTGTCGG 
TACCAAGGGG GGCGCCAAGG CTAGCCTTTA AACTAAATAT GTGGTTGAGT GAGTGCAGGA 
ATATGTAATC AATGTACAAG TAAGAAGTAT GCA 

 

Protein sequence

MSLPQGIYLT APIPKGGEHI LSTEALEFLA LLHRTFNKRR LELLKNREKV QAELDQGKPL 
SFLPETREIR ENLAWNCAPP GPGLEDRRVE ITGPTDRKMV INALNSGAKT FMADFEDSNS 
PTWSNMVLGQ VNLYDAIRRQ IDFEINGKAY KLSEKPAVLL VRPRGWHLPE PRLIIDGTPM 
SGSLFDFGLY FFHNARELIS RGSGPYFYLP KMEHHLEARL WNDAFCLATS HLGVQQGVIR 
ATVLIETLPA AFQMEEILYE LKEHSAGLNC GRWDYIFSFI KKQRAHKNCV FPDRSDVTMT 
VPFMDAYVRL LIQTCHKRKV AAMGGMSAQI PIKNDPAANE RAMSKVRADK LREVTAGHDG 
TWVAHPALIS IALEIFNQHM PGPNQYHIRR EDVTVTDKQI ADPSVPGKIT EQGLRDNVSA 
ALSYCAAWIS GNGCVPINHL MEDAATAEIA RVQLWQWCKY GSKTDSGKDI NPSYVQTILS 
EEASKVSKLP GIDPSHVKIA SEYMAQQVKA QWPSDFLTSD LLGYLEGVGT KGGAKASL