| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH02690 |
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| Symbol | |
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| ID | 3259047 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006693 |
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| Strand | - |
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| Start bp | 365484 |
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| End bp | 368064 |
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| Gene Length | 2581 bp |
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| Protein Length | 748 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638258216 |
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| Product | ATP-dependent RNA helicase, putative |
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| Protein accession | XP_572442 |
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| Protein GI | 58270572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCTC CCGTACCAGC AGCACCAGCA TTCGGCGGAT CATGGGCAAA GCTCAATCCC
CCTCTTTCTC CATGGATGTA AGTAGCTTCC CACCACATTG CTCAATCCGT CTATTCCTCC
CGCTGACATT CTGTCTAGCT TGGATGTCAT CAACTCCATG GGTTTCAAGA ATATGACTCC
TGTTCAAGCA GGTACTATTC CGAGAGCGGT AAAGAATCAG GACTGCGTAG TGGAGGCTGT
TACTGGCTCT GGTAAAACTT TGGCGTTCAC GATCCCCGTC TTGGAACGAT TGTCAAGGCG
AGAAGAACCG TATAAGAAGG GCGAAATTGC CGCCATTGTT GTTGCACCTA CACGGTTTGT
CGCTTTTTCT AATAAATTGG CTTTCTAACT CATATGTTTC TTCTCTTAGG GAATTGGCCA
CTCAAATACA TGCCGTCTTC CATCACTTCC TGTCTTCTCT CATCCCTCCG GAAAGTGAAG
AGGAGACTGG CGATGTTGAA GCTCATGCCC CACCTTTTGC CTCATCATCA CGTTCACCAT
CTCCTCAAAC CCCTGATAAA CCTCTGTTCC CTCTCCCCAT GCTTGTAACC TCGGGAACTC
CGACTCCCTA TGAGACTTTT CAGTCCACCC ATCCATCGAT TCTCATCGGT ACCCCAGGAC
GTCTCGCCGC ATTTCTCCTC AACCCTCGTG GCCTGGCTAT AGTTCGAGTA TCAGAATTGG
ATGTTCTTGT CCTCGACGAA GCTGACAGGC TGTTGTCAAG TCCTGATCAC AGGAGAGATG
TTGAGAGGAT TATGCGTCAT CTACCCAAGC AGCGCCGAAC CCATTTGTTT TCGGCTACCA
TGACCGATGC TGTGGAGGAG ATGATAGGGT TGGGCCTTCG TAATCCGGTC AGGATCGTTG
TCAATCTGAA GGATAAGAGG AAAGATGGGG AAGAACCCAA AGAACGCAGG ACTCCTATGG
CGTGAGTTTC TCTTACGGAT ATGTTTGTTT GTCTGTGTTC TGATTGCTTT GTTAGTCTCC
AAAATACATA CCTTGTCTGT CGGCACGCCG AAAAAACTCT GCAGCTTATC CGCCTCCTCC
TCTGCGAATC CACAAAGCAC GAAAGATCCA AATTTATCGT CTACTTCTCC ACTTGTGCTG
CTGTCGACTA CTTTTATCGC ATTCTCTCCC GCCTCCCATC GCTCTCAAAA TTCCATCTGA
CGTCTTTCCA CGGTGAACTG CCGCCGAAGA TTCGAGAGAC CGCGCTTTCA ACATTCACAT
CGCATCCCTC ATCCCATTTA TCCCCGGCAG TCCTTCTATG TACGGACGTA GCGGCAAGAG
GCGTGGATTT CCTGGATATA GATGTTGTAA TTCAGTATGA TGCGCCTACG GACCCCAAAA
CGTTTAGTCA TCGAGCTGGA AGGACGGCCA GAGCTGGAAG GCGAGGAAAG GCAGTTGTTC
TGTTAGGTAA AGGTCGTGAA GAGGATTATG TCGGTACGTT CCAGTCCGCA AATGCAGAAT
TGATGAAAAG AAAAAGGCAA AAAGCTCAAA GGTCCATTTT AGATTTCCTG AACATTCGTA
AAATCCCCTT GACCAAGCAA CCATATATCA ACGCTTATCT AGAAGAAGTT GACACTCCCC
AAGCCCTCGA CCCTGAAGCC ACGACTCTTC TTCACTCAAT CCGTCAAATC ATCCTCACCG
ACCGTGAGCT CTCTGACAAA GCTGCAAAGT CATTCGTCTC CGCATTCAGG GCATACTCGA
AACATGAAGC TTCGTTCATC TTCCGGACTT TGGACTTTGA TTTCAACTCT CAAGCGATTA
GTTTTGGGTT ACTGAGATTA CCAGCCATGC CGGAGATCAA AGATTGGAAA AAGAAGAAGG
AGGCAGAGAG ACAGAGACTG GAGAAAATCA AGAGCGAGGG TGGGGAAGTA GAGGAAAAGG
AAATCATTGA GTGGGAGGAT GCTGGTGTAA ACGTAAGTTC TCCTATCTCA TCATTATTCC
TGTTGCAATA TAGAGGAAGG AAGGGGCGCT GATGCTCTTT TCAAAAGTGG GATACTTTCG
CCTACGCATC AAGACAACGC GAAGCCGCTC GTCTTGCCAC CCTCGCGCAA AGAGCTGACA
ACCAATCATC CAATGATGCG GCTAGAGCCG AAGCCCGAGC CAAGCGAAAG ATAAAGGCAG
AAATGCGAGA AGCATGGTCC GAACAAAAAG AACGAAAAGT GAGAAAGGAA GAAAGGAAGG
AGAAGAAGGA TGCAAAGAAA AAGTATGAAT GGGAGTTGGA GCAGGCTAAT GGTGAGGGGG
ATCGACAGAG TGATTTGGCG AATATCGCCA AAGCGCAAGC AGAGAGGAAG AAGAGAAGAG
AAAGGGAAGA AGAGAGCTGG GATGAAGAGA TTGGAAAGGA GTATAAGAGT CTAAAGCGAG
AGATCAAGGA GGAAAAGTCT GTCAAGGAGT CGAGTAAGGG AGGAGCGGGT GGAGGAGGTA
TAGGTGGTGG TATGTTTGAT GATCTCGAGT AATCTTTCAT CCATTTTTCT TTTCAGGATT
TTGATTTCGC ATAAATCGAA AGAGTTGTAT ATATACGATG CGAAATCAAT GTTATCAACA
T
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| Protein sequence | MDAPVPAAPA FGGSWAKLNP PLSPWILDVI NSMGFKNMTP VQAGTIPRAV KNQDCVVEAV
TGSGKTLAFT IPVLERLSRR EEPYKKGEIA AIVVAPTREL ATQIHAVFHH FLSSLIPPES
EEETGDVEAH APPFASSSRS PSPQTPDKPL FPLPMLVTSG TPTPYETFQS THPSILIGTP
GRLAAFLLNP RGLAIVRVSE LDVLVLDEAD RLLSSPDHRR DVERIMRHLP KQRRTHLFSA
TMTDAVEEMI GLGLRNPVRI VVNLKDKRKD GEEPKERRTP MALQNTYLVC RHAEKTLQLI
RLLLCESTKH ERSKFIVYFS TCAAVDYFYR ILSRLPSLSK FHLTSFHGEL PPKIRETALS
TFTSHPSSHL SPAVLLCTDV AARGVDFLDI DVVIQYDAPT DPKTFSHRAG RTARAGRRGK
AVVLLGKGRE EDYVGTFQSA NAELMKRKRQ KAQRSILDFL NIRKIPLTKQ PYINAYLEEV
DTPQALDPEA TTLLHSIRQI ILTDRELSDK AAKSFVSAFR AYSKHEASFI FRTLDFDFNS
QAISFGLLRL PAMPEIKDWK KKKEAERQRL EKIKSEGGEV EEKEIIEWED AGVNWDTFAY
ASRQREAARL ATLAQRADNQ SSNDAARAEA RAKRKIKAEM REAWSEQKER KVRKEERKEK
KDAKKKYEWE LEQANGEGDR QSDLANIAKA QAERKKRRER EEESWDEEIG KEYKSLKREI
KEEKSVKESS KGGAGGGGIG GGMFDDLE
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