Gene CNH01990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01990 
Symbol 
ID3259287 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp568167 
End bp569188 
Gene Length1022 bp 
Protein Length279 aa 
Translation table 
GC content45% 
IMG OID638258288 
Productexpressed protein 
Protein accessionXP_572373 
Protein GI58270434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCCA ACGCTTTACG GATTAGGACA ACAAGGCGAC AAGGAGTGTA CCTCGGTCCT 
CGAGCTTTGG GAGCCATTCG TGCTGATTAC CTGGTATGTA GCACGCATGA GGCACAACGG
ACTCAAAAGC TGAAACTAAG ACACATAGAT CCCTTTTCCG TTGTCTCAGA TCTTCACAGA
AACTTCAATT GCTATAAGGG CGGAGGTTTT TTCGTTCTTG TTGCAACTAT TGATGAGCAG
ATGGATCCTT GCAGAGACAA AACGAACGGA CAAAGAGATG ATGGTATATT CTTTGTCAAC
TGATCAAAGA CGAGAATTGA GGAGCTTGTG GTGCATGAGG GGAAAGCTTT TGTGGTTCCT
CGAGTGAGTG CATCCGATGA ATTGTGGTAA TACAGCGATC TGATATATTA TTGTACACAG
CATGGTCTAC ACTTGGTTGA CTGGAAGAGT TATCGAGAAC CAAACAGCGT CATTTAGAGC
CAAGCTGGAA GAGTTGACCT CTTTAGGATC GATGATCACC CTGGAACTAG AACAGTATGT
GCCTACTGTA TCTCCTCGGT ATCTCTGGAC TGAACAGGCA TTTTAGTACT AGGAAGCTCA
GAGATTACAG TTTCCTTAAT CCGGCCTCGT CAGACCTATT GGAAGCAATC TTTGGCATTC
TCGATATGAC TTGTACACTG TCAGATAGTC TCACTTTGTT CAAAGCCCAG TCGACACCCG
ACAAGACTCC CCAATTTGTA ACCAAGCGGA GACGCAGAGT ACGTCGGCTA CAAAGGGATT
TGTCGTCAGA CGAAGAGATG GGGAAGATGA TTGAAGGACC ATCACAAACC ACGGGCGAAT
ACAAAAAGGT CTCAAGTGGG AAGGCAAACT TGAAAGAAAT GCAGAGGGAA CTACAGTTCT
GTGTCGGGGT GATAAAAAAT GCAGTAGAGA AACTGAGCAT GGAACGCGAT GGAGAGCTTT
GGGCCGAGTT GAGTATTGCT CTGGAAGAAT GGCATGAAGT ATAACTGCAT ATTTTATTTT
AT
 
Protein sequence
MNPNALRIRT TRRQGVYLGP RALGAIRADY LIPFPLSQIF TETSIAIRAE VFSFLLQLLM 
SRWILAETKR TDKEMMVYSL STDQRRELRS LWCMRGKLLW FLDMVYTWLT GRVIENQTAS
FRAKLEELTS LGSMITLELE HTRKLRDYSF LNPASSDLLE AIFGILDMTC TLSDSLTLFK
AQSTPDKTPQ FVTKRRRRVR RLQRDLSSDE EMGKMIEGPS QTTGEYKKVS SGKANLKEMQ
RELQFCVGVI KNAVEKLSME RDGELWAELS IALEEWHEV