Gene CNH01220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH01220 
Symbol 
ID3259286 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand+ 
Start bp830808 
End bp831919 
Gene Length1112 bp 
Protein Length295 aa 
Translation table 
GC content53% 
IMG OID638258361 
Productconserved hypothetical protein 
Protein accessionXP_572312 
Protein GI58270312 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAAAC CCAACGTCCT CCTCTTCGGC CTTGGTGGTA TTGGTGGCAT CTACGCCTCC 
ATTCTCCAGC TGTCCGGCAA GTGCAATGTG CACGTCGTTG CCAGAAGCAA CTACCAGAAG 
GTCAGAAACC AGGGATTCAA GATTATCAGC CCCAAATTTG GAAATCACGA CGGTATGAAG 
TTTGCCGGTG GTGGGTTGCT CGCGTTGTTT GACCTTGTTA CATACGAAAG CTGACAGCGA 
GATCAGTTTG GAAGAGTACA GATGAGGCTG CCGCCAGCGG CGCAGAGTTC TCTTATGGCA 
AGTTCTACTC CCGTGTCTCT CTCCACATCA TGCTAGTCTA ACAGGAAAGC AGTTCTCTGC 
GCCAATAAGG CCTTACTCGA TGCCAAACCA TCCCTTCCAG ACCACCTCCG ACCCATCATC 
TCGCCTGCCA CATCCATTGT CCTCTTGCAA AACGGTGTCG GAGCCGAAGT TCCTCTCCAC 
GAAGCCTTCC CCAACAACAC CATCATCTCT GCCGTCGTCT GGACGGGTGG TAAGACTCTC 
CCCGACAATG AAGGCGTTGA GCAATTCAAC CGTGAAGGAC TTACTATCGG CGTTGACTAC 
CGAGAAGGCG GGGACAGGAA GGAGGAGGAT GAGAAGCTTG AGACGTTGGT GGGCCTCTTG 
GAGGCCGGCG GTGGTGATTG CATCGTCACC AAGGATATCC AGAGCGAGAG ATGGGTCAAG 
GTCATTTGGA ACTGCTGTTG GAACACTCTC ACTGCATCGA CTCTGCTCAA GACTGGCCCC 
TTCTTCCAGT CCTCCGACCT TGCTCTCCCT CTTTGCTATT CCATCATGAA CGAAGTAGTT 
GCCGTCGCCA AAGCCAAGGG TCTTACCGTC CCTGATGGTA CAACGGAGAA GCTCATCAAG 
CAATGTACCG ACGTGCCGTA CCCTGGTTTA CCGTCTAGTA TGATGGCGGA TGTCAAGGCT 
CAACGACCTA CAGAAGTTGA GGTGTGTCCC ATGCTGCCCC AAATGAATTA GAGGCGTGGA 
TTGGATACTG ATGATTTGTT CAGGTTATTC TTGGCACACC CGTGCGAGAA GGTATCCGAC 
TGGGTGTTCC CGTCCCTACC ATCACAACGT GA
 
Protein sequence
MSKPNVLLFG LGGIGGIYAS ILQLSGKCNV HVVARSNYQK VRNQGFKIIS PKFGNHDGMK 
FAGVLCANKA LLDAKPSLPD HLRPIISPAT SIVLLQNGVG AEVPLHEAFP NNTIISAVVW 
TGGKTLPDNE GVEQFNREGL TIGVDYREGG DRKEEDEKLE TLVGLLEAGG GDCIVTKDIQ 
SERWVKVIWN CCWNTLTAST LLKTGPFFQS SDLALPLCYS IMNEVVAVAK AKGLTVPDGT 
TEKLIKQCTD VPYPGLPSSM MADVKAQRPT EVEVILGTPV REGIRLGVPV PTITT