Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNH00990 |
Symbol | |
ID | 3259204 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006693 |
Strand | - |
Start bp | 902764 |
End bp | 905135 |
Gene Length | 2372 bp |
Protein Length | 590 aa |
Translation table | |
GC content | 48% |
IMG OID | 638258382 |
Product | myo-inositol transporter 2, putative |
Protein accession | XP_572293 |
Protein GI | 58270274 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GAGCGACTGT CCCAGTTCGG ATGGTCTTGC CGGTGTCTCT CAATATGGCT GATTATATAA CATGGGAGAT GGTCTCTTTC AGCAGCCGAC AGCGTTATAG TATCTTCTTG ACCCGCCTTG TCCAGCTCCC CCTCCTTAGT AAACATACCC AGTGCCCTAC CCTCAACAAC ATCACATTTT CGCCATGAGC AGCACACCTT CCCAACTTGA CAAAGATACA GGTTTATCAA AGTTTGTCGA GAATGCGAAT GAGATTGAGA CCATCGAAGA TACTGGGGTT CCGCCTATCA AGCCCTCTGG GTTCGGAGGT CATCTGATAG TGAGTGATAT CTAGACTTAC TTCGCAACCT CAGAGCTAAC AGAACTGAAG GATGAAAATT TAGTAAAGGT TGAAGGAGAA GATAAAGTAA CACCGTATTT GTGCTTTTTG ATCTCTGCTG TGAGTTCTTC TTAGGTGTCA AAGGCGAAAG CGAAGCTAAT CAATGAACAG TCCGCCATTG CTGGTTTCCT CTTTGGTTAT GATACAGGTG TTGTTGGCGT CGCATTGCCT CTTGTTGGTA CCGATTTAGG AGGATCCGTA CTTTCTTCAT CACAGCAAGA GATCATTACC GCAGGAACAA CAATAGGTGC TATCTTTGGT TCGGCTATTC TCGGTGGCTG GGGTGACCGC TTGGGACGAA AGGTTGCAAT CTTAATCGCT GACTTCTTGT AAGTTTATAC TTAGTCACTT TGAATACTTT TGATTAACTT CTGTCTCAGC TTCACTGTTG GTGCTGTACT CATTGCTGCG AGTTATTCTG TCCCACAAAT GATTGTCGGT CGAATCGTCC TTGGTGTCGG TGTTGGTGGT GCGGCAGCCA TTGCGCCTCT ATTTATCACA GAAACCGCCC CCACAGCCGT TCGAGGTAGA TGTATCGGTG TTAAGTGTGT TATTTTTATG TCTGCTTTGC GCAGCTCAAA GCTAAATGTT GGGGTAGTGC CTTCTTCATC CCCTTTGGTC AGGTGGTTTC AGAAGCTATA GGTGCTGGCG TTCAAGACAT GAAGAATGGC TGGCGTCTTC TCTGTACATA TCCCCCTCTC GCCGTAGAAG ATTTAAGTTG ACTCCTTTTT AGTCGCCCTT GGCGCTGTTC CATCTCTCGT ACAGCTCGTC CTCTTCCACT ACCTCCCGGA GTCACCCCGA ATCCTCATCC TCCGTGGCCA AACAGACCGT GCTCGACATG TCTTCAGTAG CATATACCCC AACGCAACTC CCGAGATGAT CGATTACAAA TTCCGCGTCG CTCAGGAATA TGTTGCGGCT ACCACTGCCC TCCAATCTGG TACAACTTAC TGGCAGCGAG CAAAAACACT GTTTACCAAG GGTTCTTACC GTCGTTCCAT CGTTACTGTT AGTCTCATTC AGATGGCTGG CCAGCTTTCC GGTTTCAATA CTCTTCTTTA TTATGCAGGT ACTCTATTCG GTCTTCTCGG TTTGACCAAC CCAGCTCTTG GAGGTCTCAT TCCTGCTGGG ACAAACGCGT TCTTCGTTCT CGTCGGTATG ACCTTGGTTG ACAAGGTTGG TCGGCGGGGC TTGTTGATGT TTGGCGTTCC AATTATGGTA AGTCAAATAT CTGATAAGTT GCAGTATCGT GACTGACTTT ATCTGCATTA CAGCTTGCTG GTTTGGTTTG GAACATTGTA GCATTCCACT GTAAGCAAGC CCTGTAACTG ACATTGTCCT CCAAGCTGAT CATTTCGATA GATCTGTGTA TCCCCACTGG CGGTCTTCTC GATACATCGT ACACATACGA CACAAAGCTC GTCGGTATCG TCATTGGCGG TATCGTCTTC TTCACCACCG GCTTCGGTCT TACCTACAGT CACTTGGCCT GGTACCAATC TGAATTCTTG GCGCTTGAAG TTCGATCCGT CGGCTCCGGT ATTGCCACTA CTGCCAACTG GGTTGCAAAC CTCGTCGTAT CTGTATCATA TCTCACCGAA CTCGAAACTC TCACACCTTC TGGTACCTAC GGTCTTTATC TTGGGTTTAG TGTCGTGTTC TTCATATTTG CCATCTTCTG CTACCCCGAA ACAAGTAAGT CTCCCTTCAC AAATTTTCTG TGTCACAATG CTGACAATAG CCGACAGAAC AACTTTCCAT TGACGAAACA TCTCTACTCT TCGAGGAGGA TTGGGGAGTC AAGCGTTCCA GGCAGATGCG TCGAGAACGT CGGGAAGCTC AACGTCGTCT GGCGGATTCC GAGATGACGG AAGTTGTTAC CGCCCATGTC CAAGCACAGA AGCAAAAGGA CAGCGCCGTT ACTCGATCAG AGTTGGATAA CTTTATGGCG AGGTTGAAGA ATGGTGGCAG GAGGCTCTCG GTCCCACAAT AG
|
Protein sequence | MSSTPSQLDK DTGLSKFVEN ANEIETIEDT GVPPIKPSGF GGHLIDENLV KVEGEDKVTP YLCFLISASA IAGFLFGYDT GVVGVALPLV GTDLGGSVLS SSQQEIITAG TTIGAIFGSA ILGGWGDRLG RKVAILIADF FFTVGAVLIA ASYSVPQMIV GRIVLGVGVG GAAAIAPLFI TETAPTAVRG RCIGVNAFFI PFGQVVSEAI GAGVQDMKNG WRLLFALGAV PSLVQLVLFH YLPESPRILI LRGQTDRARH VFSSIYPNAT PEMIDYKFRV AQEYVAATTA LQSGTTYWQR AKTLFTKGSY RRSIVTVSLI QMAGQLSGFN TLLYYAGTLF GLLGLTNPAL GGLIPAGTNA FFVLVGMTLV DKVGRRGLLM FGVPIMLAGL VWNIVAFHYL CIPTGGLLDT SYTYDTKLVG IVIGGIVFFT TGFGLTYSHL AWYQSEFLAL EVRSVGSGIA TTANWVANLV VSVSYLTELE TLTPSGTYGL YLGFSVVFFI FAIFCYPETK QLSIDETSLL FEEDWGVKRS RQMRRERREA QRRLADSEMT EVVTAHVQAQ KQKDSAVTRS ELDNFMARLK NGGRRLSVPQ
|
| |