Gene CNH00950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNH00950 
Symbol 
ID3259031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006693 
Strand
Start bp914640 
End bp916189 
Gene Length1550 bp 
Protein Length464 aa 
Translation table 
GC content56% 
IMG OID638258387 
Producthypothetical protein 
Protein accessionXP_572289 
Protein GI58270266 
COG category[S] Function unknown 
COG ID[COG5087] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.372143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACCTCCTCCA CTCCCTCTCC CCGCTCCCAA ACACCCAGCC TCTAGGCCTC ACCGTCCTCG 
CTTCCCAGCC TAAACGCACA CGCGAGCTCT TCCCACACGC TGTCCACCCA CCAAAATGCA
CACAGCAAGA ATGGTTGGTC GTTTTCGACT CGGAGATGGA GACGGACAAG GTCAGTATCA
AAGACGCGGG AGACGGCAAG AGCGCGAAGC ATCCTCGGGT CCTCATCGCC GCCATATCCG
CCCACCTCTA CACCTTTTCC CCCTCCGTCC CTTCCGTCCT CTACATATCC AAAGTCGACT
CCTCGGGCTA TTCTTCATCC GCCACCCCTC TCCCGCTGAC ACGCCACTTG ATCCGCTCCT
TCATCCTCTT CTTCCTCGCC CACTGCCCTG CTCTGCGAGT CCAGCTTTTT GCAAGAGCAC
AGAGACAGTA CTTGTTTGCA AACTCGGCGG ATTGGAAGGG AAAGAAAGTC CTGGGCGGAG
CGGGACTGTG CAAGTGGTGG AAGGGGGTCT ATGAGGACGT GGTTAGTTCG TGGGCATCTT
CGTCTCCCAG CCCTGGTCCG GCTGGATCTA CTGGATTGAA ATTAAAAGTA GAGAAACAGG
CCATGAAATT ACGGTTCATC TTACCTGGGT ATGATGAGCA AGAAGCCAAA GCACTCCTTG
GAGCTGGGAG ACCTTTACCA GAAGGCGTGG AATGGACGTA CACACCACCG TTCACATCGC
CTCTCATCCC ATCGGCTTCC GGCTCTGGCT CCGGCTCCGA TCCCAAAATA TCGCTCGCAA
CGCTCATACC GTCCTTACCA GATGACCCCA AAACCCGTTT TCTCCAAGAA CTCGTCTCTG
AACATCCCCG TCCGCCCACC TCTTCAGCGA CTGCCAAAGA CGAGCAAGGC GGACAGGAAA
TATCAAATGA TGGGTCAGGG CCGGGAACAG GACGAGGTGG AAGAGAAGGA GGAAAAGAAG
GCAAGACAAG GAAATTGCAC GAAGCAGAGG AAGACGCTGC TCAACGAAAG TTTGCGGAAA
ACATCTTGCA TTCCGTTGGG ATCGCCGAGT TTTGGGAAAG GATGGGGTTC AGGCAGGAAT
GTGCGAGCGG GGATGTGACG GGGTTCTTCA CGCTCGAATC TGTAACAGAG GTAGAGAGTA
AACGGAAAAG CGAAGAATCG TCCCCTGATG CCACCACGCC CATCGCCACC GCTGCCGCCG
CTGCTACCCC CGCCATCGCC AAAAACGCGC TCCTCCCTCA AGCCATCACC GAACGCCTCC
TTACAGCGCT CACCAACCTC GATTTCGCGA GCCCTTCTCT TGCAATAGAA GGAAGCACGA
TCTGGCTCGA GCAAACGCGT TCGATCGTCG TCGGTGAAGT GGGAAAAGTG GGGTGGGACC
TTTGTGTAGG GAGGATTGAG GCGAAGGCTG GACAGGCGGG GCAAACTGGA CAGGCTAACA
TGGGGGTTGG AGATGGTGGG GCTCGGGAAG GAGCTGGAGA AGGGGTAAGG AAAAGGGAAG
AGGTTGTGAC CATGTTACAG CCGAGAAAGA AAAAAAAGGT CGTTCAATAA
 
Protein sequence
METDKVSIKD AGDGKSAKHP RVLIAAISAH LYTFSPSVPS VLYISKVDSS GYSSSATPLP 
LTRHLIRSFI LFFLAHCPAL RVQLFARAQR QYLFANSADW KGKKVLGGAG LCKWWKGVYE
DVVSSWASSS PSPGPAGSTG LKLKVEKQAM KLRFILPGYD EQEAKALLGA GRPLPEGVEW
TYTPPFTSPL IPSASGSGSG SDPKISLATL IPSLPDDPKT RFLQELVSEH PRPPTSSATA
KDEQGGQEIS NDGSGPGTGR GGREGGKEGK TRKLHEAEED AAQRKFAENI LHSVGIAEFW
ERMGFRQECA SGDVTGFFTL ESVTEVESKR KSEESSPDAT TPIATAAAAA TPAIAKNALL
PQAITERLLT ALTNLDFASP SLAIEGSTIW LEQTRSIVVG EVGKVGWDLC VGRIEAKAGQ
AGQTGQANMG VGDGGAREGA GEGVRKREEV VTMLQPRKKK KVVQ