Gene CNH00780 details

Gene Information

• Locus tag: CNH00780
• ID: 3259072
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 966901
• End bp: 969092
• Gene Length: 2192 bp
• Protein Length: 490 aa
• GC content: 49%
• IMG OID: 638258404
• Product: conserved hypothetical protein
• Protein accession: XP_572270
• Protein GI: 58270228
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG5073] Vacuolar import and degradation protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGGTGGCGA AAATAGAGTC AAATCAATCA AATTGCCACT CTCAGGCTGC TGGAAGACTA 
CCGCGCCATA TTCCTCTCGA TGCCTTTGTT GCTTGCTCCG TCATTTCTTA ATATAATCCT 
CATTTTCACT TTACATCCAC ACAAATATTT CATCCCTTTC AATTCAATAA AACAACTCAA 
TCAAGTTCAT CAAATCAGGA TTACTTAGCC GTTATGCCTA CGGAATCCAC AACTTCCGAG 
CCCCCTCTTC CCACATCGCA CACACCTGCC GGTGTTGTCA AATGCTCCAT CTGCGGAATA 
GGTAACCTCT CGCAGCCAAT GTCCATCCCA GTCAGCGACT ATTTTGGTGG ATCAGCTGTC 
GAGTTTGGAG AGAGAGTGTG CGGGAGATGC GCACTGGCTA GAGGGCACGG CGAGTCTGAC 
ATTCAGAGCC AGAGCCAGTA CGAAAACCAG AGTCGAGATA GGGAGAGGGG GTGGGAAAAA 
GAGTCTGAAG TGCGAGAGAG GGGGAGAGGA GGTGTGAAAC AAGAAAGTGG GAGAACGCTG 
GACGATGTGC ATGAGGAAAA TGAAACCGCA GAGCGCAAAG GTATCGTACG CGACCTCAAA 
GCTCCCACAT TTTCACAGTC CCTGCCTTCC CAATTGCCTC AGCCGTGGAC CACTACCAAA 
CCAGTGCCTT CGCCCCCTAG CAACGCAAGA GGGCTCGCTG CATCTCCGAA ACCTGACGCT 
GCAACCAGGA GCAAGGAAAA GATGAATCAG CCTCCTAATC CACTTTTGGA TATCACGAGG 
ACGAGGGTAC GCAGTATCGG CCGAGGACCA CTTTACCCTG GTAGTGTTTT TAAAGGGACT 
CAAACGAGCG GTAGAAGCGC ATACGATGTG GAAGTAAAGT TTCTGGTAAG CCACGTTTCA 
TTCTCATTGA CTAGATGACC AACCAGCCCC TCATAGGATG TGGATTTCGC CGATTCCACG 
TTATCCGGCT ATCTCTCTAT TTCTCACCTC ACCGATTCTC ATCCACACCT CACCACATTT 
TTCACCGGCG AAATCATCGG GCCCAAGTAC GGTTTCATTA CTGGCCCACG CTATGCTGCC 
ACAGAACATG ACGATCTCCG CCACTGGGGC CGTTTCGAGC AATTTCGCAG ACCGTCGACT 
AGGGCAGACT TGGTAGGTGA AGAGCTGTTC TTAAGGGATC CTCTGCCAGA TAGGTCTAGA 
GGCGAGACGA AAGGGAAAGA GAGGGATTTT GTGTTTCTAA GGATCAAGGA GCAATTTTTG 
GTACCGGATC ACAAGGTGAA GGATATCTCA GGAGCGAGTT TTGCGGGATT TTACTATATC 
ATGGTTGACA TGGCCCCGAC CGTTACTGTG CCCGTCTCTC AACCTGCGAC GCCTCTTTCT 
CCAACCTTCA AATCACCTTT TGTCCCCGGG AGTCCTGCTA TCAGTCGTCG AATGTCGGGT 
ACGGCCATGC CTGCATTGGG GCTCGGGATG GGTATGGGTT TAGGGGCGAC TATCGGTGCC 
GGCGTGGGGC CGGGGATGGG CATGGGAGGG GAACAGGTCA GCGGGATCGA TAGGACTCGA 
CCTGCCAGAC CTTCAGGCAC GAGGAAGGAG AGCGGCGGGC GGATGAGGGA GAAGGAGGTC 
CGAGGTGAAC CTACGATTCG CGGGGTACGT CCTTATCAAG AACTCACTCG TTCGCATCAG 
TGACTAACCC GTTGGCTTTA TTTAATCTTT TGGGATCCTT GGGATTCAAA CCATCTAGTA 
TTATTTCCAT TCACTCGTAA GTCAAACTTA CATTAGCAGT CATTCGTGTT GCACATATTG 
ACTTTTATCT TTTTCTTCAG AATCAAGAGC CATTCCAAGA ACTTTTCCTC TCACATGTCC 
CGCAGAAGAG CAAGTACGCA TTCGAGTTCC GCTGAAGGGT GAACCTTTCG TCCAGTCTTC 
AAAGGTTTTC GATACTATTG ATTGCCCCAG ATCATAGTAA TCGTATTCAG CTGATCAATC 
GCATTTTCCA AAATCACACT CCGCTCACCT GGATTGGTTT AACGACGCGT CGTATATGTA 
GCTTCGTTTT GTAAGGATCC CATGATTGAT CCTCATATTA GTTTTTTGTT TTGTTTTGTT 
TGCTTTTTTG CTTGTTTGTT TACTGGTACG ACTTCTCTAT GTGATTTGTG ATTGTAGTAT 
GATCACCTTA ATGCATCTGT TATGTATTGT TC 

 

Protein sequence

MPTESTTSEP PLPTSHTPAG VVKCSICGIG NLSQPMSIPV SDYFGGSAVE FGERVCGRCA 
LARGHGESDI QSQSQYENQS RDRERGWEKE SEVRERGRGG VKQESGRTLD DVHEENETAE 
RKGIVRDLKA PTFSQSLPSQ LPQPWTTTKP VPSPPSNARG LAASPKPDAA TRSKEKMNQP 
PNPLLDITRT RVRSIGRGPL YPGSVFKGTQ TSGRSAYDVE VKFLDVDFAD STLSGYLSIS 
HLTDSHPHLT TFFTGEIIGP KYGFITGPRY AATEHDDLRH WGRFEQFRRP STRADLVGEE 
LFLRDPLPDR SRGETKGKER DFVFLRIKEQ FLVPDHKVKD ISGASFAGFY YIMVDMAPTV 
TVPVSQPATP LSPTFKSPFV PGSPAISRRM SGTAMPALGL GMGMGLGATI GAGVGPGMGM 
GGEQVSGIDR TRPARPSGTR KESGGRMREK EVRGEPTIRG YYFHSLNQEP FQELFLSHVP 
QKSKYAFEFR