| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNH00620 |
|---|
| Symbol | |
|---|
| ID | 3259259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006693 |
|---|
| Strand | - |
|---|
| Start bp | 1004433 |
|---|
| End bp | 1007739 |
|---|
| Gene Length | 3307 bp |
|---|
| Protein Length | 765 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 638258421 |
|---|
| Product | cation:cation antiporter, putative |
|---|
| Protein accession | XP_572254 |
|---|
| Protein GI | 58270196 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.28528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AGTTTATACT TTCCGGCTTT CCATATCACC AGCCGCTGCT AGCCTAGGCT CGTACAATGC
AGCCACCCAC CACGCCCACT TCCAACCGCC GATCCCATTT TCCTTCTTCC CGCCAGTCCT
TTTCGGCCGG GTCGGCAGCC AAACCCCGAC GATACCAGAG TCGGCAAAAT TCATTCTTAA
GACTGTTCAT CGGGGCATTG GCGATAACTG CTAGCAAAAC ATGGGTTATC GATAACCATG
GAGGAGAGGG AGGGGGTGCC GGGTGGCTAG TCCTGGCATA CTGGGCCTCA AGAGTGTTTG
TTGAAGGAAA GCAAGTGTGG GATGGAAGAA GACGAAAGGC CTTTCGGTTA GATGCAACCA
GCAATGGAAT AGGAGTGAAG GTGAGTTGAT GAAAACAGTG CTATATAGCA AATCTCATTG
ATGGCATAGG ATTACATACT CTCGAGTTTC AATTATGTGC TTCAGTCACT GGCATTCTTC
ATGTCTCTGG GTTCCTTAGG ACCCTTCAAG TAAGTCCCGA GATCGTCCTT GCAATCCTTT
GCTTATTAGG TTATGCAGGA CTTCTATAAT AGGTATGACC GGTAGCTTGC TCGCAACAGC
GCAGCCCACA ACTATCCGAT CAGTACGTAG ACGAGGCAGC TGGAAAGATA TAAAAGACTA
ATCAGTACTC AGTTTGGACC TTTACTACCT CTGATACTAG CCTCTGGCTA TGCTTTTGCC
CAACAGCTTT TGCTAAAAGA CTGTACGTTC GAAAGTATTT CGAATAAACA AAGATCAATA
AGCTCATGTT ACTGCAGTTC AAGCAGTCAT TGTCATCTTG GTGTTCGCAT TAACCACATC
TGTCATCCAG GGTCGTTTCC TCGAACCCAA GACAGCTGGC AGTAGAGAGA CCATAGATGG
AAGGCACAGC TTGTATAGGA CCATTTTATC TGCTTTGGTT GCTACTGTAT CAGTTATAGC
GCTCTACTTC ATGGTGTGTT GGTCTTAGTT AATTACTGAC TAATGATAAT CTTGGGCTGA
CAATTTGTCT TTAGGGGTTC ATACCCATAC CTGTTCCTGT ATCATCGACT GCCTCACAAC
GCTTCGGTTC CTTCGTCGCT GCCTTCCTCG TCAGCAATAT TCCGCTGTCG TTTGGTCAAA
ACTCCCCTTC CAGCGCCGGT CTTCGACTCA AAACATGGCG CGACAAGGCG ACCTTCTTGA
CTTGTATTCC TATTCTTCAG TTCTTCGCTT TACATCCTAT ACCCACCACT GTAGATGTGG
TTATCCTTTT GCCTATTTCG GTGTTCAGCA TCTGGGCAGA GTCAATATTT AAAGCACAAC
CCGAACTCGC GCCCTCGGTA TGTTATTCCT TGAGCAATTG GATACCAGCT GATGACTTTC
AAGTGGACGT TTTCCAATCA TAATCTCTCC ACTGCCAATC ATTCATGGTC TTTTCTCTCA
CTTGTACCCT CCAGATGGCG GCCTCATTTT CAGACAATCA TCAGCACTCC AACTTCATCG
CGCATATTCT ACTTTCTTCT TCTCAACTTG GCCTATATGG GCGTGCAGAT GGGCTATGGA
GTATTTACCA ATTCCTTGGG CCTCATCTCT GACGGTAAGT CGGCTTCAAG ATCTGATTAT
TATCAAAGCT GATTCGTGAA TAGCCATTCA TATGCTGTTT GACTGTCTCG GTTTGGGCGT
AGGATTGTGG GCCTCTGTGG CAGCGATGTG GAAACCCGAT GGGCGATACA CCTTTGGTTA
TTCCCGTGTC GAAACCCTCA GCGGATTTGC AAATGGGTGT TTTCTTATTC TCATTTCAGT
TTTCATCATA TTTGAAGCCA TACAGCGAGT GTACGTACTA TTCTTCATCA ACTAATGTAG
GACTAATAGA GAGAATACTA GGTACAACCC GCCGGAAATG GAGACTCACC AATTACTGCT
CGTTTCGGGG ATAGGGTTGG CCATCAATTT GTGGGGAATG TGGGCTACCG GAGGGCATCA
TCATCATGGA CATAGTCACG GACATGATCA TGCCCAAGTA CACGCTGCAC CCAAAGTAGT
GAGTTTTAGG TGAAACCGAG ATATCTCTTA CTGACTAAAG CTTAGGAGGT ACACAAACAG
GGAGTATCCC AAAATGACGC TCATAAATAT GAAGATCATC ATCTTGATCT TCACAGTCAT
GACCATCACC ACAAACCTAG CGCCGTACGT TTCTTTCCCT CTTGCAAATT CCCTATCGTG
TTTTCTGACG GTAACTGTAG TCGTCAAAAG TCAGTCCTCG TCCGGCATCC AAACTGCAAA
AACGCAAATC CTCTGGTCAG CTCAAGGATT CTGGTCCAAG CGCAACAACC CCGCAGAAGA
CGAATAATGG GCATAACCAT GATGAGCATT GTTCGCACGA CGGTGAAAAG CATTCAGTAA
GTCGGCGACT ATATCAACAA TCGCAGTACT CATCCGCTAT TCATTCAGCA TTCTCACAAT
CACCATAAAT TGACCCACGA ATCTTCCACT CACAATGATG CCCATGCCCA CGAAGACGAC
TATGACCACG CACACGCTCA TGGTCACGGT CATGATCATG ACCGCGGACA TGATCATGCC
CATAGCCATA ACATGCGGGG CGTATTTTTG CATGTTTTAG CCGTGAGCCC ATTCGAGGAA
TGTTAAAAAG CGAGCCAAGG TCTAATACAA ACTGTAGGAT ACACTCGGTA GTGTAGGCGT
CATCATCTCA ACTATCCTCA TCCGATTTAC AGGCTGGACA GGCTTCGACC CTATCGCTAG
TTTATTTATT GCTGCCCTCA TCATGGCGAG TGTAATCCCG CTAGTCGTTG ATTCCGGCAG
GATCTTATGC TTGGACGTTG GGGAAGAGAA GGAAAGTGAA ATCCGGAGCG CACTGACCGA
GGTGAGTCCC TTTGCGATGG GTTGTGATAT CAAAGGGAGG GGAGGTACCA AGTTGACAAT
CTGTCCAAAA GCTGTCGTCC GTGGACGGCC TAGCGAGTTA TGCTGCCCCT CGCTTCTGGC
CTCGATGTGA GGGAGAACTC GTCGGTTCGA TCCACATCCA ACTGGCCCCT TCTCCCTCTT
CTTTTGATCC TACCCGATTA TCCACACCTC CAAGCAGTTC GCGGCCTCGC AAGGGTGACG
CGATTTATGC CAACTCTGAA AAAGTGGTGG GGAGGGTGGA AAAAGTTTTG AAGAAGCGGA
TAAAAGGTTT GACGGAACTT GTTGTACAGG TTGAAGGGAG CGAAGAGAGG TCGTTCTGTA
CGTGCATGAC AGGTGGGGAT CAATAGATTG TGTTTTTTTG AATGTTTTCA TCAGTTATAG
CATAGCA
|
|---|
| Protein sequence | MQPPTTPTSN RRSHFPSSRQ SFSAGSAAKP RRYQSRQNSF LRLFIGALAI TASKTWVIDN
HGGEGGGAGW LVLAYWASRV FVEGKQVWDG RRRKAFRLDA TSNGIGVKDY ILSSFNYVLQ
SLAFFMSLGS LGPFKTSIIG MTGSLLATAQ PTTIRSFGPL LPLILASGYA FAQQLLLKDF
QAVIVILVFA LTTSVIQGRF LEPKTAGSRE TIDGRHSLYR TILSALVATV SVIALYFMGF
IPIPVPVSST ASQRFGSFVA AFLVSNIPLS FGQNSPSSAG LRLKTWRDKA TFLTCIPILQ
FFALHPIPTT VDVVILLPIS VFSIWAESIF KAQPELAPST IISTPTSSRI FYFLLLNLAY
MGVQMGYGVF TNSLGLISDA IHMLFDCLGL GVGLWASVAA MWKPDGRYTF GYSRVETLSG
FANGCFLILI SVFIIFEAIQ RVVGHQFVGN EVHKQGVSQN DAHKYEDHHL DLHSHDHHHK
PSASSKVSPR PASKLQKRKS SGQLKDSGPS ATTPQKTNNG HNHDEHCSHD GEKHSHSHNH
HKLTHESSTH NDAHAHEDDY DHAHAHGHGH DHDRGHDHAH SHNMRGVFLH VLADTLGSVG
VIISTILIRF TGWTGFDPIA SLFIAALIMA SVIPLVVDSG RILCLDVGEE KESEIRSALT
ELSSVDGLAS YAAPRFWPRC EGELVGSIHI QLAPSPSSFD PTRLSTPPSS SRPRKGDAIY
ANSEKVVGRV EKVLKKRIKG LTELVVQVEG SEERSFCTCM TGGDQ
|
|---|
| |