Gene CNH00550 details

Gene Information

• Locus tag: CNH00550
• ID: 3259136
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006693
• Strand: +
• Start bp: 1024776
• End bp: 1026939
• Gene Length: 2164 bp
• Protein Length: 475 aa
• GC content: 48%
• IMG OID: 638258430
• Product: conserved hypothetical protein
• Protein accession: XP_572249
• Protein GI: 58270186
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0266] Formamidopyrimidine-DNA glycosylase
• TIGRFAM ID: [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg)

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCCACATCCA CCTCAGTTGA CATGCCAGAG CTCCCTGGTA AGTTCATGGT CAGGTATCCA 
GCTATTGCTA AGCTATTACA GAGGTTGAAC GAGCTCGGAA ACTTATTGAA GACTCCTGCA 
AGGGGTACAA GATCGCTTCA GTCGATGCTC AAGAAGACAG TATCATCTTT ACCGGTGGAA 
CAGACCATAA CGAATTTGCC AAAGAGATCG CAGGAAGGTC TATAACAGGA TGTGAGCGGA 
AAGGAAAAAC GTGCGTGCGG GCAGACCAGG TGTCAGCTGG ATTTGCGACT GATGAAGGAT 
GGCATAGGTT CTGGATGACC TTGTCGGGTG AAGGACGATA CCCGGTGATG CATTTCGGCA 
TGACAGGTAT GATACAGCTC AAAGGTCAAG AACCAACTTG GTATCGGAGA AGGCCCAAAG 
AAAGTGCGGA TGTCTGGCCT CCCAGAGTGA GTCTTGTTTT CAACACCGTT TATATGAGCT 
AACAAGAAGA TAGTTCTATA AGTTGTATGT CATCAAGTTA CACTGAATTA TGCAGCTAAA 
CAAAATATAG CGTACTAAAG CTTGAACCTC AAGAAGGCTC CATCGCCGAT GAACCTCGAG 
AACTTGCTTT CATAGATGGC AAGTCACCCC GCGACTCTTC CAACGTTACG CTAATGCCGC 
CCCAGGGCGT CGGCTTGGTC GTCTTCGTTT GGTATCTGAT CCTGTATCTT CCCATCCTCC 
CGTCTCGGAG TTAGGTTTCG ACCCTATACT CAATCATCCA ACTTTGGAAG AGTTTACAAA 
GCTGCTGGTG AACAAGAAAG GTACTGTGAA AGGCGTCATC ATGGACCAAG CATTCAGTGC 
GGGTGTTGGC AATGTGAGTT TTCCCATAGA AGCGAAACGC GCAAGCTAAC CCGTTCATTG 
CAGTGGGTTG CAGACGAGTG AGCCTTAAAA AAGCTCCTTA ATTCCACTAA CCCGCCCTAG 
GGTACTTTAC CAGGCCCGTA TCCACCCTTC TTGCCCCATT CCCGCATTAT CCGAACAAAA 
CATTAGAGAT CTCCACCACC AACTCCGTGC TGTGCCTCTC ACCGCAATAT CTGTCAATGC 
TGATTCGAAA CTTTTTCCTT CCGACTGGCT CTTCCGCTGG AGGTGGAGTA AAGGTACAAC 
TCAGAAAAAG CAGATGGAGA AGGACAAAAA GAGTAAAGGG AAGAAGGTCG TGGACGGTGA 
GGGGGGTGAG GACGTGGAGC CGGAGGATAA AGAGTTTTTG GAGCTTGTAC GTTGATGATA 
TTTACCTTCC TCGGGCAAGT TGACTGAACA ATCGCTTGAT AAGCCCGATG GATCACCAGC 
CACGATCAAA TTTATTGAAG TCGGTGGACG AACGACTGCA CTAGTCGAAG AGCTGCAAAA 
GATGCCGGAA GGAGTCGAGA TCAAGCCGAA AATCAGTAAA GGCGGCAAAA GGGCCGGAGC 
GAAGAGGAAG AAGGTCGCTA AGGAGGAAGA ATCGGTGAGT TCCTCTGGTC ATGATCACAA 
GACAAAATGT TAACCTGTGG CATCATAGGA TGAAGGGAGT GAACTATCCG ACCAGAGTGA 
TTTAGAAGAG CAGAAACCCA AAAGACCTCT GACGGCAAGA CAAAAAGCAG CCGCAGAGAA 
AAAGGGGATC AACAGTAATT TAGCCTCGCA GACGAAAACT GAAGATAATA AACCTTCTGC 
TGCAAAACGA CGAGCCATTG GAGCAAGGAC TGGGGGGTCC AAAAATCATC CGGATTCGGA 
GGTGAAGAAG GAAAAAGGGA GTACAGAAGT GAGTATGATC GATTGCTTTA GGTGTATGAT 
GGACTGTTGA CTGCATTGAC GTCTTGTCTA TCTTTCTTCC ACTCGAAATC CATTGCGTCT 
CTATTACTCG CCGTGCAACC CTTGGACACC CTCTTCTCCC CGCTACAATC ATTATCGACT 
CACAGTGTCG TAAATCCAAG AAGCAAGTGG AGGCAGTTGG CGAAAAACTT GCAAAGATCA 
AGCCTCAAAA GGGTAGAAAG AAGGCAGCTT CAACTCCAGA GTCTTCAGAA CTGTCCGATC 
TTGTCGAATA GTTCAAAGGC ACAAAATGGT GATTGAGTGC TCCGTTTGTT TTGACTAGAT 
GAGGCCATAA GACGCACGTA GACTATACGC TGTACGTTGT AAGTGCAGAA GAATAACTTT 
TGCG 

 

Protein sequence

MPELPEVERA RKLIEDSCKG YKIASVDAQE DSIIFTGGTD HNEFAKEIAG RSITGCERKG 
KTFWMTLSGE GRYPVMHFGM TGMIQLKGQE PTWYRRRPKE SADVWPPRFY KFVLKLEPQE 
GSIADEPREL AFIDGRRLGR LRLVSDPVSS HPPVSELGFD PILNHPTLEE FTKLLVNKKG 
TVKGVIMDQA FSAGVGNWVA DEVLYQARIH PSCPIPALSE QNIRDLHHQL RAVPLTAISV 
NADSKLFPSD WLFRWRWSKG TTQKKQMEKD KKSKGKKVVD GEGGEDVEPE DKEFLELPDG 
SPATIKFIEV GGRTTALVEE LQKMPEGVEI KPKISKGGKR AGAKRKKVAK EEESDEGSEL 
SDQSDLEEQK PKRPLTARQK AAAEKKGINS NLASQTKTED NKPSAAKRRA IGARTGGSKN 
HPDSEVKKEK GSTECRKSKK QVEAVGEKLA KIKPQKGRKK AASTPESSEL SDLVE