Gene CNG04050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNG04050 
Symbol 
ID3258871 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006692 
Strand+ 
Start bp1141827 
End bp1142976 
Gene Length1150 bp 
Protein Length283 aa 
Translation table 
GC content47% 
IMG OID638258029 
Productvacuole protein, putative 
Protein accessionXP_572153 
Protein GI58269994 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.701829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTCGTTGCAA CTTGCCCAAA TTCACAATGT CCTCGCCTCC ACGATACACC GAAGAGCCAA 
ATCTACGACC AGCTCCTTCA AAGGCCTATG GCACAACCCC CGCCGACACT GCTGCCACGC 
AACCCCTTCT CGCAGCTCAG GCGTCTACTA ATGCCCAACG CGCAGCCGAG GAAGGTTGGC 
GGGACGACGA GGATAATGTG TCGGACAACT ACAAGCTCGG TGTCTCTGTC TCTGACTGCG 
ATACTGAAAT CCGAATGCTC TTTATCCGCA AAGTCTACTC CATCCTCTTG ATTCAATTGC 
TCGCCACGGC AGGAGTGTCA ATTCTTCTCT CCTTGCCGTC GGCCAAGGAC TTTACCCACA 
CCAACCCGTG GATCATGTGG ATCCCTCTGA TTGGTAGCTT TACCAGCTTG TTCTTTGTCT 
ACTGGAAGAG GCACCAACAC CCGGCGAATT TGATCTTGTT GGGTTTGTTC ACTTTGTTCG 
AAGCGACGAT GATTGGGTTG GCTGTGAGTT ACTATGAGAG CCGAATTGTG AGTAGATGAG 
TTTTCTTCTT CATCTCCTAT TAGTCGCTGA CCATCCATCA ATAGGTGATT CAAGCGCTGT 
TCATCACTCT TGGCGTCTTC ATTGGTCTTA CACTCTTCAC CTTCCAAACC AAAGTACGTT 
CCTTTCTTCT TTCCCATCCC TTCACTAATT TCTCTACTTC TTCTTTGCAG TACGACTTTT 
CCTCCTTCGC ACCCATCCTC TTCATTGGCA TCTGGGGTCT CCTCACCACC TACCTCATCC 
AGATCTTCCT CCCATTCAAT GCCACCGTCG ACCTCGGTAT TGCCTGTTTC TCGACCCTCT 
TGTTCTCTGG TTTCGTGTTA TATGACACAC AGCAGATTAT GAAGAGGTTA AGTGTGGATG 
AGGCGATTGC GGGAGCGTTG ACGCTTTACT TGGACTTTTT GAACTTGTTC TTGAGCATCT 
TGAGGATAGT GAGTGCCGTC AACAGTGATT GTGGGAATAT GGAAGCTGAA TCATTCTGTT 
ACCTTAGCTT AACAACTCGA ACGACCGTTA ATTGTCTAAT ACCCAGATCA TCCCTTTTAA 
CAATAATAAA CATGTTGATC TTGTCAAAAA TACGGTGTCG TAACTAGTAA TGTATCTATG 
TATCTGTTGC
 
Protein sequence
MSSPPRYTEE PNLRPAPSKA YGTTPADTAA TQPLLAAQAS TNAQRAAEEG WRDDEDNVSD 
NYKLGVSVSD CDTEIRMLFI RKVYSILLIQ LLATAGVSIL LSLPSAKDFT HTNPWIMWIP 
LIGSFTSLFF VYWKRHQHPA NLILLGLFTL FEATMIGLAV SYYESRIVIQ ALFITLGVFI 
GLTLFTFQTK YDFSSFAPIL FIGIWGLLTT YLIQIFLPFN ATVDLGIACF STLLFSGFVL 
YDTQQIMKRL SVDEAIAGAL TLYLDFLNLF LSILRILNNS NDR