Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNG02500 |
Symbol | |
ID | 3258830 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006692 |
Strand | - |
Start bp | 708238 |
End bp | 710033 |
Gene Length | 1796 bp |
Protein Length | 506 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257871 |
Product | PHD-finger protein, putative |
Protein accession | XP_571991 |
Protein GI | 58269670 |
COG category | [B] Chromatin structure and dynamics |
COG ID | [COG5034] Chromatin remodeling protein, contains PhD zinc finger |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GCAGAAACGA CATAGCGCTC ATCTACCAGC CAGACTGTAA CAGACTATGC CCAGACAGCC TCCAGCCAAG CGCGCGAGGC TCTCCACCAG GGCGATTTCA TCTACCTCGG AACAGCCAGA AGTTGGCCCA TCTCGCTCTG TTAATGATGA ATCACCCACT AAGCTTGACA AGGGCAAAGG CAAAGCGGAA GCCACTACTA CACAAACACA AGAAAAACAA GGCAAACAAT CAGAAGGAGA GATGGATGCA ACTGAAGAGC TTGAAGCATG GCAAGATTTT GCTGCGGATC ATTATGAAAC GGTTGAGCAA TTACCTTTGG AGCTGCATAG GAATTTTAGA TTGCTGAGGG AGTTGGACGA CGGCACGTTA GGTAGGTTTG GCATCGAGCT GAAAATCAGC AGCTGACTTT GATTGTTACA GCACAAATGG ATACGCTGAA GAAACTTATA CGTACTTATG TGTCCGGAAG AATAGCTCTA GAACAACCAA GATCATTGTC AACTCCATTA GAAGAAGCGG CGCTCAAGAA AAGTAATAGG GAGGAGGATA GTATCGATGC TGAGAGGGCA GAGGAAACAC TGTCACATCA TGACTCACCT CAAGAAGGAG AAGAAGGTGT TAATCCAGCC TCTGAGATTA CAGCGGAGCC GGCGAACTCG GGTGAACCGT CTTTAAACCC ATCGTTAACA GATGAGAAAC AGAAAGAGCC AGGTGTACCT CTAGCAGACG GTGCAGGTGG TCTCATCATT CCATGTTCAC CAGAATCTCA AACAAGAGTC CCAGCACGAG CAAAATTCCC TTCCTTGCCA TCGTCACCAA CGGCTCGACA CAATGGGGCC ATTGAGAATG ACGATCCAAA CATCGATTCT CTTGCCCGAG CTGCAGCCCA ACAAAACCGT TCTTCGTCAA TCCCGCTGAG AGCATCTCGA CCGGCTGGTC CCCATTCTCT GCTGCCGGAA ATTTCGCGCC TTGCCCGCGA AATTGTACGG ACTAGCGATG AGAAAGTTGC TGTCGCCATC GGCGCTTACA ACGCTGTAGG TCTTTGTCTG AATTTTGCAG GTATCGTTAA TTGAAATACA TATGATGTAG GTTGACAGGC ATATCCGCGC TCTGGATTCT GCGCTCACGG CCCAGGAAGC GTCCATCCTC CTTGGTCTTC GCCCTTCAAC ACTCCCATCA AATGCCATCG ACGAGGCTCT CGATCTAGAA GGTAGTACGG GCAAGGCGGG CACTGGGCAA CTCGTAGATG GGCGGAGTCG TGGGCAAGGA ACTGGAGACG GTGTGGGCGA AGGGGACGAA CGGGAGGTGA CACTAGGAAT AGGTGGGGGC GGGTCGAGAA AGAAAGGAAA AAAGAGAAAA GGAAAGCCAA AACAAAGAGA ATATCAGGAC GGGAATGAAG AAGGCAAGGT GGAAGAAAAC TGGAATATCC CTCCAGACCC GTACGTGATT CATTTACATC CGATTCAGAG CAAGGCTGAC AAATGACAGA AATGAGCCGA GGTACTGCTA TTGCAACAGA GTGTCGTTTG GAGAGATGAT TGGCTGTGAT GTGAGTTCTT TTGCCTTATC CCTCTCTCAA CTGTATAATG ACCTTTATAG AACGACGAGT GCCCATTAGA ATGGTTTCAT CTTCAATGTT TAGGCTTTGA GAATCCGCCG ACAGGCAAGT GGCTATGTGA TCTATGTAAA CCAAAAACAA ACGGTCATGG TGCGGGGACT TCTGCGGGAG CGGCTAGAAG GAGCCGGGTC AGTGGGGGAA GGAAAAGGTA GCCTATCCAT ACCCCTTATA ATGCAG
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Protein sequence | MPRQPPAKRA RLSTRAISST SEQPEVGPSR SVNDESPTKL DKGKGKAEAT TTQTQEKQGK QSEGEMDATE ELEAWQDFAA DHYETVEQLP LELHRNFRLL RELDDGTLAQ MDTLKKLIRT YVSGRIALEQ PRSLSTPLEE AALKKSNREE DSIDAERAEE TLSHHDSPQE GEEGVNPASE ITAEPANSGE PSLNPSLTDE KQKEPGVPLA DGAGGLIIPC SPESQTRVPA RAKFPSLPSS PTARHNGAIE NDDPNIDSLA RAAAQQNRSS SIPLRASRPA GPHSLLPEIS RLAREIVRTS DEKVAVAIGA YNAVDRHIRA LDSALTAQEA SILLGLRPST LPSNAIDEAL DLEGSTGKAG TGQLVDGRSR GQGTGDGVGE GDEREVTLGI GGGGSRKKGK KRKGKPKQRE YQDGNEEGKV EENWNIPPDP NEPRYCYCNR VSFGEMIGCD NDECPLEWFH LQCLGFENPP TGKWLCDLCK PKTNGHGAGT SAGAARRSRV SGGRKR
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