Gene CNG02500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNG02500 
Symbol 
ID3258830 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006692 
Strand
Start bp708238 
End bp710033 
Gene Length1796 bp 
Protein Length506 aa 
Translation table 
GC content49% 
IMG OID638257871 
ProductPHD-finger protein, putative 
Protein accessionXP_571991 
Protein GI58269670 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5034] Chromatin remodeling protein, contains PhD zinc finger 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCAGAAACGA CATAGCGCTC ATCTACCAGC CAGACTGTAA CAGACTATGC CCAGACAGCC 
TCCAGCCAAG CGCGCGAGGC TCTCCACCAG GGCGATTTCA TCTACCTCGG AACAGCCAGA
AGTTGGCCCA TCTCGCTCTG TTAATGATGA ATCACCCACT AAGCTTGACA AGGGCAAAGG
CAAAGCGGAA GCCACTACTA CACAAACACA AGAAAAACAA GGCAAACAAT CAGAAGGAGA
GATGGATGCA ACTGAAGAGC TTGAAGCATG GCAAGATTTT GCTGCGGATC ATTATGAAAC
GGTTGAGCAA TTACCTTTGG AGCTGCATAG GAATTTTAGA TTGCTGAGGG AGTTGGACGA
CGGCACGTTA GGTAGGTTTG GCATCGAGCT GAAAATCAGC AGCTGACTTT GATTGTTACA
GCACAAATGG ATACGCTGAA GAAACTTATA CGTACTTATG TGTCCGGAAG AATAGCTCTA
GAACAACCAA GATCATTGTC AACTCCATTA GAAGAAGCGG CGCTCAAGAA AAGTAATAGG
GAGGAGGATA GTATCGATGC TGAGAGGGCA GAGGAAACAC TGTCACATCA TGACTCACCT
CAAGAAGGAG AAGAAGGTGT TAATCCAGCC TCTGAGATTA CAGCGGAGCC GGCGAACTCG
GGTGAACCGT CTTTAAACCC ATCGTTAACA GATGAGAAAC AGAAAGAGCC AGGTGTACCT
CTAGCAGACG GTGCAGGTGG TCTCATCATT CCATGTTCAC CAGAATCTCA AACAAGAGTC
CCAGCACGAG CAAAATTCCC TTCCTTGCCA TCGTCACCAA CGGCTCGACA CAATGGGGCC
ATTGAGAATG ACGATCCAAA CATCGATTCT CTTGCCCGAG CTGCAGCCCA ACAAAACCGT
TCTTCGTCAA TCCCGCTGAG AGCATCTCGA CCGGCTGGTC CCCATTCTCT GCTGCCGGAA
ATTTCGCGCC TTGCCCGCGA AATTGTACGG ACTAGCGATG AGAAAGTTGC TGTCGCCATC
GGCGCTTACA ACGCTGTAGG TCTTTGTCTG AATTTTGCAG GTATCGTTAA TTGAAATACA
TATGATGTAG GTTGACAGGC ATATCCGCGC TCTGGATTCT GCGCTCACGG CCCAGGAAGC
GTCCATCCTC CTTGGTCTTC GCCCTTCAAC ACTCCCATCA AATGCCATCG ACGAGGCTCT
CGATCTAGAA GGTAGTACGG GCAAGGCGGG CACTGGGCAA CTCGTAGATG GGCGGAGTCG
TGGGCAAGGA ACTGGAGACG GTGTGGGCGA AGGGGACGAA CGGGAGGTGA CACTAGGAAT
AGGTGGGGGC GGGTCGAGAA AGAAAGGAAA AAAGAGAAAA GGAAAGCCAA AACAAAGAGA
ATATCAGGAC GGGAATGAAG AAGGCAAGGT GGAAGAAAAC TGGAATATCC CTCCAGACCC
GTACGTGATT CATTTACATC CGATTCAGAG CAAGGCTGAC AAATGACAGA AATGAGCCGA
GGTACTGCTA TTGCAACAGA GTGTCGTTTG GAGAGATGAT TGGCTGTGAT GTGAGTTCTT
TTGCCTTATC CCTCTCTCAA CTGTATAATG ACCTTTATAG AACGACGAGT GCCCATTAGA
ATGGTTTCAT CTTCAATGTT TAGGCTTTGA GAATCCGCCG ACAGGCAAGT GGCTATGTGA
TCTATGTAAA CCAAAAACAA ACGGTCATGG TGCGGGGACT TCTGCGGGAG CGGCTAGAAG
GAGCCGGGTC AGTGGGGGAA GGAAAAGGTA GCCTATCCAT ACCCCTTATA ATGCAG
 
Protein sequence
MPRQPPAKRA RLSTRAISST SEQPEVGPSR SVNDESPTKL DKGKGKAEAT TTQTQEKQGK 
QSEGEMDATE ELEAWQDFAA DHYETVEQLP LELHRNFRLL RELDDGTLAQ MDTLKKLIRT
YVSGRIALEQ PRSLSTPLEE AALKKSNREE DSIDAERAEE TLSHHDSPQE GEEGVNPASE
ITAEPANSGE PSLNPSLTDE KQKEPGVPLA DGAGGLIIPC SPESQTRVPA RAKFPSLPSS
PTARHNGAIE NDDPNIDSLA RAAAQQNRSS SIPLRASRPA GPHSLLPEIS RLAREIVRTS
DEKVAVAIGA YNAVDRHIRA LDSALTAQEA SILLGLRPST LPSNAIDEAL DLEGSTGKAG
TGQLVDGRSR GQGTGDGVGE GDEREVTLGI GGGGSRKKGK KRKGKPKQRE YQDGNEEGKV
EENWNIPPDP NEPRYCYCNR VSFGEMIGCD NDECPLEWFH LQCLGFENPP TGKWLCDLCK
PKTNGHGAGT SAGAARRSRV SGGRKR