Gene CNG01600 details

Gene Information

• Locus tag: CNG01600
• ID: 3258778
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006692
• Strand: +
• Start bp: 455060
• End bp: 457082
• Gene Length: 2023 bp
• Protein Length: 420 aa
• GC content: 49%
• IMG OID: 638257777
• Product: GDP-mannose transporter, putative
• Protein accession: XP_571874
• Protein GI: 58269436
• COG category: [G] Carbohydrate transport and metabolism; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG5070] Nucleotide-sugar transporter
• TIGRFAM ID: [TIGR00803] UDP-galactose transporter

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GCCATGGCCT CCTACACCCC CTCCTCTTCC CGCCCACACA CCCCTCTGGG TCTCTCTCCT 
AGAGGCTCGT ATACCAACCT CGCCTCTGCC GCGTACGACG CGTCTTCCCC CGGAGGACAT 
GGTGCGAAGG ATGAGAAGGA GAGGCTGAGG GCAGAGCGTG AAGTACAGGA GGCGTTGTTG 
AAAGCACAGG ACGGTGTGGA AAAGGCCAAG AAGGAGGAGG TATGCATGCC CGCGAGCACT 
ACTGGTGAGT GATAAATTCC GGGCGGGAGT GCCGAGTGAT GTCGCTCGAC ACTTGAACTG 
GAGCTCATCA TTCGTCGATG GTGCTGACAG ATGAGGGTAG TACTGCCGAT CCTGAGCTAC 
TGTGTTGCAT CGATTATGAT GACCGTTGTG AACAAGTTTG TGGTATCTGG TCGACAGTTT 
ACAATGACGT TTTTGCGTGA GTCTATCCCG GAATCATTGT TTTCTCTGAT ACTGACCGCT 
GGATAGTCCT TGCTATACAA TCGTTCGTCT GTGTTGCGTG TGTATGGCTC GCCAAGCGCA 
TAGGCGTCAT CAACTGTACG GCATTCCCTC ATCTTCCTTC CATTACGTCA AGCTGACCCT 
TCAACAGTCC GTGACTGGGA CATGAACGAT GCCAAAGCGT GGTTCCCAGT GTCGTCCCTT 
CTCGTCGCCG TGATTTACAC TGGTTCTAAA TCGCTCCAGT TCCTCTCAAT CCCTGTCTAC 
ACGTAAGTAT CCTCCTGCCC CGTATCTCAC CAATACGAAG CAATCAACTA AACCAAATCA 
CGACAGAATC TTCAAGAACC TTACCATCAT CCTCATCGCC TATGGCGAAG TCATTTGGTT 
TGGCGGGCAC GTCACTCCTC TCACTCTTTG TTCATTCTTT CTCATGGTCG GTTCGTCCGT 
CATCGCTGCA TGGGCCGACA TCTCCACCAC CCTGTCAAAA TTATCAGCCG GTGTCGCCGT 
TGTGGACCCC ATCTCTGGCG CCGATGTTCC CCTTTCAAGT ATTAGCGTGA TGGATACGAT 
GAACGTGGGT TACTTGTGGA TGTTTATCAA CTGCTTGGCA TCGGCCGGCT ATGTCCTTTT 
TATGAGGAAA CGTATCAAGG TGACTGGATT CAAAGACTGG GATTCAATGT TTTACAACAA 
CTTGCTTTCC ATCCCTGTTT TGTTTGTCTT TTCTCTCATC ATCGAAGACT GGGGTGCTGC 
CTCTTTCTCC CGCAACTTGT ACGTCCCTTT TTCTTTTTTT CTTTTTTCTT TCCAGCTTCC 
TCAGACTAAC AATCACCTAC CACTACAGCC CTGAAGAAGG CCGAGCCTTC CTTCTCTCCG 
CTATCGCCTT TTCCGGCGCC GCCGCCGTCT TTATCTCTTA CTCCACCGCC TGGTGCGTCC 
GTATCTGCGG CGCGACGACA TACTCCCTCG TCGGCGCTCT GAACAAGCTC CCCGTCGCGG 
CTAGCGGGAT CTTGTTCTTT GGGGACCCGG TTAACTTTGG GAATGTGAGC GCTATTCTGG 
TTGGAGGCGT AAGTGGGATT GTTTATGCGG TGGCCAAGAC GAATCAGGCA AAGGTGGAAA 
AGTCAAAGCA GGCGAGAGGG GGAGAAAGCA AGGCGTAATC TAATGTTTGT GGTGTGTGGT 
ACTTTTTCTT TTTTTTCTGT AAATGGGATT GGAATATGAA GGGAAATGTG GATAGCTAGG 
CTTTTTTTGG GGGTTATGGG CTGGTATAAC ATCTTCATAT TGAAATAAAG GGTATCAGGC 
AGTCATCATA TTTATTTCTA CAGCGTGTAT ACGTGTAATT TTTCAGATAT GGTTTTGTTT 
TTATTTCATA CATGTTACGA TGAAACCCAA TGATTAGAAG GGGTGGAGAA AAGAAGAGCA 
AAATCTGGTC GTCTCTCTCA TCCCTCTCCC TACATCTGAA ATCTTCAGAT GACTCATATA 
AGTAAAAAAA AATATATACT GTAGTATTCC TAATAATCCA AACTATTCAA ACCCCGCTTA 
CCGCCTCGCA GCACCCCGAG CCCCAAACAT ACCTCTCGCC ATT 

 

Protein sequence

MASYTPSSSR PHTPLGLSPR GSYTNLASAA YDASSPGGHG AKDEKERLRA EREVQEALLK 
AQDGVEKAKK EEVCMPASTT VLPILSYCVA SIMMTVVNKF VVSGRQFTMT FLLLAIQSFV 
CVACVWLAKR IGVINFRDWD MNDAKAWFPV SSLLVAVIYT GSKSLQFLSI PVYTIFKNLT 
IILIAYGEVI WFGGHVTPLT LCSFFLMVGS SVIAAWADIS TTLSKLSAGV AVVDPISGAD 
VPLSSISVMD TMNVGYLWMF INCLASAGYV LFMRKRIKVT GFKDWDSMFY NNLLSIPVLF 
VFSLIIEDWG AASFSRNFPE EGRAFLLSAI AFSGAAAVFI SYSTAWCVRI CGATTYSLVG 
ALNKLPVAAS GILFFGDPVN FGNVSAILVG GVSGIVYAVA KTNQAKVEKS KQARGGESKA