Gene CNF04930 details

Gene Information

• Locus tag: CNF04930
• ID: 3258307
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006691
• Strand: +
• Start bp: 1434228
• End bp: 1436352
• Gene Length: 2125 bp
• Protein Length: 559 aa
• GC content: 46%
• IMG OID: 638257611
• Product: trehalose transporter, putative
• Protein accession: XP_571460
• Protein GI: 58268608
• TIGRFAM ID: [TIGR00879] MFS transporter, sugar porter (SP) family

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCGGCG TAACAGGTAT AAGTCTAAGT CTCTCTTCAG AGGAGCTGAA GACTCAAGAC 
GTGGAGCAAA ATGAAAAGCT TGACAGCACC ACAAACATGT TTACCAACGC CGCTGCAGCG 
ACTGGTGAGT CAATATTTTG AAAGTGAACT CAAGTACGGA CGCATTGCTA ATTTCATTAT 
TGCAGACAAG GAACATAACA TGACCTTGTG GCAGGGCTGT AAACTCTACC CCAAAGCGAT 
CTTGTGGTCC GTCCTTATAT CTTCCTGTTG CGCAATGGAA GGTTACGACA TATCTCTTGT 
AGGGAATTTC TGTAAGGTCT CTTACGTCGA TACGATAGCA AAAGCTGACA CTGTCATTAG 
ACGCCTTTGA CCCTTTCAAT CGAAAGTATG GAGTGCAAGG AGTTGATGGC ACATATCAAG 
TCCCCGCTCG ATGGCAAACT GGCCTAAGTA ACGGAGCGCA ATGTGGCCAA ATCTTGGGTT 
TGATTGGTGA GCGGTCCTTG CTAGTGATAA TCAAGATCTA ACACTACTAA CACTACTTCA 
CAGTTAATGG TCTCGCAACT GAGCGTTTCG GTTATCGAAT TGTAATCTTG GGCTGTCTAA 
TCTGGCTCAC TGGTGTGACC GCAATCTTCT TTTGCGCTCC CAATATTCAA ACGTTACTCG 
CGGGTGAAAT TCTTGCTGGT ATCCCGTGGG GTGTTTTTCA GTCGAGTAAG TAAGATGGCT 
CAAAGATGAG GCTCAGAGCT GACCGTTCAC AGTTGCCATA TCTTACGCTG CTGAAGTTTG 
CCCAGTGGCA CTTCGAGGAT ATCTCACCAG TTATGGTAAT TTCTGCTGGG GATGGGGACA 
GCTCATTGGT ATTGGAGTAA TAAAATCTCA ATTCGGTCGA ACCGATCAAT GGGCATACCG 
CATACCTTAT GGACTTATGG TGAGAGGGAA GTATATACTT GCCCGATCTG AAGCTGACTC 
TGGACTTAGT GGATGTTCTA TCCTCCCTTA ATTATTGGTA TCTACTTTGC TCCCGAATCT 
CCCTGGTGGC TGGTCCGCAA AGGTCGAATT GAACAAGCCA AGAAATCTTT GCTTCGATTG 
ACTTCTTCCA AGACCGATCC TACATTTGAT GCTACCGAAA CAATCGACAT GATTCGACAC 
ACTACTGAAT TGGAAAAAGA TATGACTTCT GGTGCCTCTT ACCTCGACTG CTTTAAAGGT 
GTCAATCTCC GCAGGACTGA GATCGTTTGT ATGCTTTGGG CTACTCAAAA TTTGGCTGGC 
AACACGTTCT CCAATTATTC CACTTACTTC TTCGAGCAGG CTGGTCTTAC CGGTGAAATC 
CCATACGATT TCGCGATGGG TCAGTACGCC ATCAACATGG TCGGTACTTT TGGGGCATGG 
TATCTCATGA CTAAAATGGG TCGACGAACT CTTTTCATTG GTGGTCTCTG CGGTCTATGC 
GTTACCTTGT TGTCTATCGG CTTCGTCGGT CTCGTTCCTG AATCTAAAAA GCAAGCCGCT 
TCTCTTGCTA CAGGTGCTTT AATGCTGGTG TGGGCGGTGT TCTACCAGTG CTCCGTTGGG 
TGAGTGAAGT CTTCTTGTCC ACACTCTCCG ATACAGTATT AAACCCTGGA TTTTTTAGAA 
CTCTCGCCTT CTCCCTTGTT GCCGAGATGT CAACTCGACG ACTTCAAATC AAGACCGTCG 
CTCTGGGCCG AGCTGCTTAC AACGTCGCTG CCATCATCAG TAACGTCCTT ACCCCGTATA 
TGATTAACCC TACTGCTTGG AACTGGGGAA ATTATGCTGG TTTCTTCTGG GGAGGATCGT 
AAGTCGGAAC ATGATCCCGA TGAGTATCTT AGCTGACAAG AACGCCCCTC TCAGATGTTT 
TTTGGTATTG GTTTACGCCT ATTTCCGGGT ACCCGAGCCT TCCGGCAGAA CTTTCGCTGA 
GGTGAGTGAA TCTAATTAGG ATAATCCCGC AACATAAAGA AGCTTATTCT CACCGATTCT 
ACAACAGCTC GATATTCTAT TCGAACGAAA AGTTCCAGCT CGAAAATTCA AAACCACCGA 
AGTCAACGCT TTCGATGTTG TTTTGCATCA CCAAGTTGCC GAAGACAAAC CTGACGGTGA 
AGTTAGCCAT GTCGAACGAG TTTGA 

 

Protein sequence

MSGVTGISLS LSSEELKTQD VEQNEKLDST TNMFTNAAAA TDKEHNMTLW QGCKLYPKAI 
LWSVLISSCC AMEGYDISLV GNFYAFDPFN RKYGVQGVDG TYQVPARWQT GLSNGAQCGQ 
ILGLIVNGLA TERFGYRIVI LGCLIWLTGV TAIFFCAPNI QTLLAGEILA GIPWGVFQSI 
AISYAAEVCP VALRGYLTSY GNFCWGWGQL IGIGVIKSQF GRTDQWAYRI PYGLMWMFYP 
PLIIGIYFAP ESPWWLVRKG RIEQAKKSLL RLTSSKTDPT FDATETIDMI RHTTELEKDM 
TSGASYLDCF KGVNLRRTEI VCMLWATQNL AGNTFSNYST YFFEQAGLTG EIPYDFAMGQ 
YAINMVGTFG AWYLMTKMGR RTLFIGGLCG LCVTLLSIGF VGLVPESKKQ AASLATGALM 
LVWAVFYQCS VGTLAFSLVA EMSTRRLQIK TVALGRAAYN VAAIISNVLT PYMINPTAWN 
WGNYAGFFWG GSCFLVLVYA YFRVPEPSGR TFAELDILFE RKVPARKFKT TEVNAFDVVL 
HHQVAEDKPD GEVSHVERV