Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF04120 |
Symbol | |
ID | 3258121 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 1192578 |
End bp | 1195845 |
Gene Length | 3268 bp |
Protein Length | 372 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257530 |
Product | expressed protein |
Protein accession | XP_571686 |
Protein GI | 58269060 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GCAGTCGCAA CTTTCAAAAC CACCTATTGA TGGCCGAGAC GAAACAGGAA TTTTGAAAGC TTGGTGGGTT TCCCAAATAC TGCTACTTAC CATATCAAAC TTAGATAGCT GACCTAATAG CCCCAAACTG TTATATTATA TGCCACTGTA GTACCTGTGG GCTTCAAGGT GGAATACAAC TGGAGAAGCG AACATGGCTA GGACACCGAC CGCTTGACCA TCTACATGAA ATGGAGAATA CCCTCCAAAT CTTAATTTTT CACCCTCGTC GGTCACAGAG ACCTCTCCTG TGGCTCCTCC GCTCCTAGCC TTTGCGGCAA AAGAGATAGA TTTATCGGCC AAATTCAAGC TCCACAAAGG CCTAGTTCAG AATCACCACC TGCACATCCA ACTATATGCG CAACGCCGCT TTTTCCTAGC GCGTCCCCTT CACGGCCATG TTCTCATGTA ATTTCCCCCC CCAACGAGAC TTTCCTTACT CCGATCGTCA TCCAACGCCT ACGCGAGATA CCGTTGCTGT CGCAGTTGCC TCGGTGGGTT TTCGACATCA TTTCAGGTCT AATTACGATC TCTATTCCCC TGCTATCGCG TATACACTCA AAGCCAAGCA TGGCTTCTCT CATCGTGCCA CCAGGGATAT GATTCAATCA GCGAATGACC TACGTCTGCT AGCAGCCATG GACCGCAATA GGGAACATGA GGTTGCAAGC TCATCATCAT CGGTCCCTCT CTCTCCGTTG CCACCCTTAG CATTCGTCAA CTCCCTGTTA GCACATTTCG TGCCACGACA GAGTGGCCAG GGGCAAATCC ATACATCATC ACCCATCTTC ATTGTGCAAC TAGCGATTGC CACTATATTT GGTACGAGAT CTCCCCCATG GAAGAGGGCT ATCATCTCCC AGATGTGTGC CCATCCTGCA AGGGGCCTTT GAAGGACCGT GATGGAAAAG ATACTTTCAA CTGGTTCCCA ATTCGAACTA TCAAGGATGA GCTTGAGGAC CTGTTGGCCA TCACAGGAGT AGAAAGCTTA ATGGCGAGCA GAAGGAATCA GAGCTGAAAA GACCTGATGC CTCGACTGTA ACGGCAAATC GGGTTTTTAG CCACCAAAGC GATGGCTCGG AATGGGTCCG GTGGCAGCTG GATGACCCAA CAGCTTTAGT CGCCAGGATA AACCTATCAG AGGATGGGGC CAACATTTCC AGTGACCTTA ATGCCAAAAA AAGGTCGATG GGTGTTATCA CGGGCCAGCT TGCCAACCTT CCGCTGGCGT TTCGCGGACG AACCAGCTGG CTCAGTGCTC TACAAATTCT TGCTCCCATT TGCTATAGAG TTGATGGCTG GCAGGACCTA CGGCTTACGG ATTAAAACCC CCAAGTATCC TGAAGGTGAG TTCATACAAC GTGTACACAT CACAAAGTTC GATTTTTTGA CATCATAAAA ACATACAGGT CGCCTAGTGT ACATTGATCT GGGACTCGTA TGCTGTGACC GACCCCTGGC TTGCGCTTTA ACTGGAGCCC CTCATTATAA GGGCGATAGT TCTCCCTGCT TCCGGTGCTT GATCAGCAAA AAGGATCTCC TGGACAACTG TACCCATCCA ACTCGCTCGT ATGAGCTCCA AACAGCCTCT GTGAGGGGAA AGGTAGCCTC ATATCTTGCC GGCTTGCGCC ACCACGATGA AAACTCAACC CAAAACGTCT TCCATGTCGA CCGTCGTTCC GGTGCCCGCA CGAATATGGA GGTGAATGGG ACCAAGAGCC TTTGGAAAAA GACGTTCCCA AACGGGGAGC ATCTCTCTGT GCTTGATCTC TTTCCCTGGT TCAACAGAGC TGTGCGCACC GTCGTCGACT CCATGCACGC AGTTTTGGAA GGAGTTCTGA AGACGTACTG GTACAAGGTT TTGTGCCAAG GGATGTACAG TGGTGGGGAA AAAGGCTCGG TGAATGAGCT GGCCGATGTG GTGACCGGAG AATCCAAGGA TGAAAACAGA GAAGTGGATC CAAATAACGA GCCCGAAAAA TCGACCAAAA AAAGGAAAGA AAGGTCTCAA GATGTATCAC CGAACCGCCA AAAAAAGCGT TCCCGAAAGG TTAAGTGGGC TTTCAAGAGC GGCAAACCAG TCTTGACTAC CAAGGAAATT GACTGGTTTA AAGCTCGGAT CCCGTTGGTA TACAAGCCTA CTTCCCTTGA AAACCTTTCT AGCGGCTTTG GAACCAAAGG CAACGGTAAG GTGAAGGCGA GCCAGTGGAG AGTTTTTGGG GAGATATATG GGCCTCTCAT TGTGCCTTTC TTTTTCGAGT TCATAGAACC ATCTTTGGGG GGCAGGACTG CGGAGGAAGG ACTGAGAGGA TTGCAAATGT CTTGAGAGGA ATTGAGCTTG AGCGAACAGA TGTACTGCAT ATATTCCCAA TACTTTTGTT CGCGTACGTA CCTTCGTTCT CTCCCTTTCT TTTGTCATCA TGCTGGCATG AATGTTTAGT TGAAAGGCTC TATATCCCGC GTTACCTTGA AGCTTCTTTC TGAACAATTG GATTTGGCCA AACAAGGGCC AGGCAATTCC TGAGAGGATT CCGATAAAGA AACGAAAAAA AGATTTATAG AATTAGAGGA AAAGCCAATA TAAAACCAAG CATGAGTGGT ATGCCGAGGT GGCATACGAG CTATTCCACG AAGATGAGGG GCTCTCTTGG GTCTGGAGAC AAGATCCAAA GGTCCCAGAT TCCTACCGAA GCAAATGAAA ATGGGAGAAA AAAAAATAAG CTGGCTTCGT GAATGATTTC CCGCTTCTGC ACGTCTCCCA GGCAAACACT GACTCCCTTT CCCAGAATGA GGAGCAAAGT CACCAGGATG GACGGCATTA TGGGTCCAAC TGGTGCCGGC CTAGATAAGG CCGAAGATAT CCTGCCCTCC AACTCGGACA TGGTTGGAGC ATGGCGTACG TCAATGGCTC AAAGACTTGC TTACAATGTC AAAAATCTAA CGTCGAAGTT TTCTTGCAGA GAAGGTCCGT AAGCAGTGCC CATGGTACTT CTTATGGAAG TCTTTAAAAC CAACAAAAAA TCCTGTCGAT GAGAGTGCCA TAAACGCCCT CTCACGACCA GATACCACTT TACTTGACCG CAGTAAGTTA CTGGAAGATG TTGGATGAGC GAGAAAATGG GAGCCTGGGA CACGGAGGAT TCGCAGAGAG GCCGTTTGTG GCGTGGATGT TGCGTGGCTG ATTTTCACAT ATTCTATCAG ATTCTATAAT AGTTTCTTTC TTTTCTTT
|
Protein sequence | MGPTFPVTLM PKKGRWVLSR ASLPTFRWRF ADEPAGSVLY KFLLPFAIEL MAGRTYGLRI KTPKYPEGRL VYIDLGLVCC DRPLACALTG APHYKGDSSP CFRCLISKKD LLDNCTHPTR SYELQTASVR GKVASYLAGL RHHDENSTQN VFHVDRRSGA RTNMEVNGTK SLWKKTFPNG EHLSVLDLFP WFNRAVRTVV DSMHAVLEGV LKTYWYKVLC QGMYSGGEKG SVNELADVVT GESKDENREV DPNNEPEKST KKRKERSQDV SPNRQKKRSR KVKWAFKSGK PVLTTKEIDW FKARIPLVYK PTSLENLSSG FGTKGNGKVK ASQWRVFGEI YGPLIVPFFF EFIEPSLGGR TAEEGLRGLQ MS
|
| |