| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF01110 |
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| Symbol | |
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| ID | 3258456 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 337442 |
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| End bp | 338830 |
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| Gene Length | 1389 bp |
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| Protein Length | 390 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | 638257234 |
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| Product | mating-type switching protein swi10, putative |
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| Protein accession | XP_571258 |
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| Protein GI | 58268204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5241] Nucleotide excision repair endonuclease NEF1, RAD10 subunit |
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| TIGRFAM ID | [TIGR00597] DNA repair protein rad10 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAGC AGAACAGATC ATCTTCAAGT AATGGTGGTT CAATAGGACC TTCGATGGGT
CCCCCCGTGT TTCAGACTGC CTCTTCTGTT CTCAAATCTG TTGCGGCTCA AGCAAGTCCA
GGGGCCAGCA CATCAACGAT GTCTTTGCGA AATGCCTCAG GAGGTCAGCC TTCCTTGTCG
ACCTCAACAT CGGCGCCGAG TCCATCAACC GTAGGATCTT CTAGCAATAC TGCAGCAGGG
ACGGGCGGTC CCTCAACAAA TAGTTCTCAA ACATCAAGGC CTATAAACAG GCCGGCAGCA
AGCAAGAACA GTATCATATA TAATGCAGTT CAGGTAATAC CTATAAATGA CCCTTTCTGT
ATACAGTGCT CATATGAATT TTAGAGACGG AACCCTGTTT TATCGGCCAT CCGTAATGTC
GGAATTGAAG TTGGCGACAT TGTAGCGGAT TATCAAGTCG GCGCCCATAA TGGCGTGCTT
TTTTTGAGGT GAGCTATAGT TGCTCTGTTG CCAATGTATA TTTCTATGCT TACGCTGTCG
TTCTGTTAGC CTGAAATATC ATAGATTACA TCCAGAGTAT ATTCACCAAC GGATAGAAAA
GATGAAGAAC ATGTACAATT TCCGGGTTAT ATTGGTCTTA TGCGATGTTG TCAGTCCCAG
CACCTAATGA TAGTCTGTGT GTGCTTATCC GGATTTTTAG AACGAACATC ACCAATCCTT
ACGAGAGCTC ACCAAGATTG CCATTATCAA CGAGTTTACT GTCTTTGTCG CCTGGTCAAA
TGAAGAGGTT GCTCAATATT TAGTCACTTT CAAGCAATTC GAACACAAAT CAGCAGACAC
TTTGAAGGAG AGGGTTCAAC AAACTTATCA TGATCAGTTG GCACACGTCC TGACAAGTGG
CAAGAAGGTG AACAAGACCG ACGCCGACAA CCTCGCCGCT GAGTTTGGCG TAAGTGTATT
ATTGAATTTC GTGTAATTCT TTAATGATTT GTATAGTCAT TCGAATCAAT CTCGCGCAAG
TCCGCCAAAT CGTTGTCGAA CGTTAAGGGT CTTGGCGCAA CAAAAGTCAC TTCTCTTATC
GACGCCTTTA CTAAACCCTT TCTCGTTGGA GGTTTGCGTC GACCGGAAAG AGAAAAGACG
GCACAGGAGA AACAAGCAGA TAGTGAAGCT GTTACATTTG CAGGCGATGA TATGACCGAT
CCGACGAGAA GCTTAGAGCT CGCGGTCGGA AACAACGACG GTAACAAAAG ACAGATGACC
GACGAGGTCA AAGGTGAAGA CATGGTCGGC GGTCAAGTAT GGCATGATCC TTTGGACGAT
GAGGATGATG ACAAGGTGGC GGAAGAAGAG CCTATAGCGA AAAGGGCCCG CATAGACACT
CCAATTTGA
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| Protein sequence | MTEQNRSSSS NGGSIGPSMG PPVFQTASSV LKSVAAQASP GASTSTMSLR NASGGQPSLS
TSTSAPSPST VGSSSNTAAG TGGPSTNSSQ TSRPINRPAA SKNSIIYNAR RNPVLSAIRN
VGIEVGDIVA DYQVGAHNGV LFLSLKYHRL HPEYIHQRIE KMKNMYNFRV ILVLCDVNEH
HQSLRELTKI AIINEFTVFV AWSNEEVAQY LVTFKQFEHK SADTLKERVQ QTYHDQLAHV
LTSGKKVNKT DADNLAAEFG SFESISRKSA KSLSNVKGLG ATKVTSLIDA FTKPFLVGGL
RRPEREKTAQ EKQADSEAVT FAGDDMTDPT RSLELAVGNN DGNKRQMTDE VKGEDMVGGQ
VWHDPLDDED DDKVAEEEPI AKRARIDTPI
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