Gene CNF00860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00860 
Symbol 
ID3258439 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp276721 
End bp278087 
Gene Length1367 bp 
Protein Length384 aa 
Translation table 
GC content47% 
IMG OID638257210 
Productpre-mRNA splicing factor, putative 
Protein accessionXP_571511 
Protein GI58268710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TCATCATTTC ATTTTACAAT CAGTAATAAA AATGGACGCT CTCCTCGCCG AAATTTCAGC 
AAAGCGCAAG GCTCTCGAAG TCCCCGAGGG AGATGCTGGT GCGAAGAAAT ATATGCGACG
AGCAGACATC GAGCGAATGC GCGAAGAAGA GGAAAGACGA AAGAAGGAGG AGGAGAGGAA
GGAGAAAGAG GCAAAAAAGG CTCAAGAAGC CAAAGAGAAG ACTGTAAAAG TAAGTACTGT
GAACCATTCT GTGTCGGACG TGTGACTGAC CGCTGCTTAG GCCGAAGCAC GTCATGCCGC
TTTGGCTAGA GTCCAAGCTG CTTCGCCATC CTCATTAAGG TCCACTCCCG ACCCAACCAT
TCCATCTGAA GAACGTTTCA ACATTTCTCC AGAAGAATGT ATCCGGAGAT TACGACAGAA
AGGCCAGCCG ATTAGACTAT TTGGAGAGTC AGACAAGGAT AGGCGTTTGC GTCTACGCGC
TTTGGAGCTG TTAGAGGAGC GAGGACCGTC GGGTGGACAG GGAAGAAATG ACTTTAAGAA
GGCTTTGGAG GAAATGGAAA GTGGGCTTGA TAAGAAGGAT GTAGAAAGGA AAGCGAGGGA
GCTTCATAGG CTTGCGGAAG AAAGAGGCAA AAAGGAAGGG TCAGCGGCAA GCGGTGAAGG
GGATAGTAAA GAAGTCGATG GGAAAGAGGG CAAAGATGAC AAGAAGAAGA AGGGCGTGGA
TATGGGTATT TTGGATTTGA AATTGATCAA GACAGACCCC AATAAGCTCT ATCCAATCAT
TTACTACGCG CTGAAGGTCT GTAGTATTTC CTCAAGGTGT GCATCGCCAG CTGACATCCT
AGTAGGGAGT ATTGAAAGAA TGGGAAGAGT GGATGGACAA CCGTCCCGAA GAAATTCGAC
GTTCTACCCA AGGAAAACTG GCTGCTGCCA ACCAGGTCCA ATCCGCCCAG TCCCTCAAAC
CCCTCTTCCG TTCTCTTCGT TCAAGAGATC TTGCCCCCGA CGTCCTTCGC CTGTTGGCAG
AAATTGTCCA CCATATGCAA AGTAGGTCGT ATCAGAAGGC AAATGACGCC TATTTAAGGC
TATCTATTGG TAATGCCGCG TGGCCTATTG GTGTGACGAG TGTTGGTATT CACGAACGAA
GTGCACGAGA GAAGATTGGA CAGGATAATA TTGCGCACGT ATTGAATGAC GAGGTAACTC
GAAAGTACAT CCAGGCGGTT AAAAGGTGAG TTGTTCATTC TTTCTGTGGT CCTACCCTAC
TGATAGATAT CAGGTTATTA ACATTCTCAC AAACTATCCG ACCACCAGAG GATGCTTCTC
AGTTGATGGG TTGAGCATAC TACTTCGTAT CTTGTTGTTT ACATTTT
 
Protein sequence
MDALLAEISA KRKALEVPEG DAGAKKYMRR ADIERMREEE ERRKKEEERK EKEAKKAQEA 
KEKTVKAEAR HAALARVQAA SPSSLRSTPD PTIPSEERFN ISPEECIRRL RQKGQPIRLF
GESDKDRRLR LRALELLEER GPSGGQGRND FKKALEEMES GLDKKDVERK ARELHRLAEE
RGKKEGSAAS GEGDSKEVDG KEGKDDKKKK GVDMGILDLK LIKTDPNKLY PIIYYALKGV
LKEWEEWMDN RPEEIRRSTQ GKLAAANQVQ SAQSLKPLFR SLRSRDLAPD VLRLLAEIVH
HMQSRSYQKA NDAYLRLSIG NAAWPIGVTS VGIHERSARE KIGQDNIAHV LNDEVTRKYI
QAVKRLLTFS QTIRPPEDAS QLMG