| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF00740 |
|---|
| Symbol | |
|---|
| ID | 3258201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006691 |
|---|
| Strand | + |
|---|
| Start bp | 237925 |
|---|
| End bp | 239330 |
|---|
| Gene Length | 1406 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | 638257198 |
|---|
| Product | pyrroline-5-carboxylate reductase, putative |
|---|
| Protein accession | XP_571245 |
|---|
| Protein GI | 58268178 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
|---|
| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCATAAGCCA CCGGCAGCAG CTCTGATAAT CCACCATATC TTTCATCTTG TCTACATCGC
ATCTGCCTCA AGATCCCTCT ATACCCAACT TACTTGCATC AAGCACGAAC AACAACCGAC
TACAATGGGC TACACTCTCG CTGTTCTCGG TATGTCGCGC TTTCCCTCGT TTAGCGGAAC
ATGAGCTGAC GCTCTTTCTA GGATGCGGTA CCATGGGCAT CGCCATCCTC TCTGGTGTCA
TCTCTTCCCT CGAAACCCGC GCTTCTCTTC CTCGCAACCC TAACGCCTCT TCCGAACCTC
CTTCCGGTAT CTCCACCCCT ACCGCCTCCC AATTTCTTGA TGCCCCCGAA GCTTCCCTTC
CTAGCACTTT CATCGCTACC GTCGGACGCG AGGAGACCGG CCGCAAGCTC AGACGCACTT
TGGCCGACAT GGGCTCTATC GGGAAACAAG TCCAGGTCCG CGCTGGTCAA GGGAACGTCA
AGACCGTGGA CGAGGCCGAT GTCATCTTGG TGTGTTCCAA GCCTCAGATT GCGAGGTCCA
TCTTGGAGGA GGAAGGTATG AGCAAGGCAT TGGAGGGAAA GCTGCTCATT TCCATCTGTG
CGGGTGTGAC CATCTCTCAA CTGAAGAGCT GGGTGCCCGA GAGCACCCGG GTGGTGCGAG
CTATGCCAAA CACTCCTTGT AAGATCGGAG AAGGCATGAC TATCGTGACC CCCTTGTCTG
ATGCTCTTTC TCGAACACTT ATCCTCAACA TCTTTACTTC TTGTGGCAGA TGTCGATTCC
TCGACGAGAA GCACTTTGAC GCTTGTACCG CCCTTGCGGG CTCTGGTCCT GCGTTTGTGG
CTTTGGTGTT GGAGGCTATG GCCGATGGTG GTGTGATGAT GGGTTTGCCC AGGTCTGAAG
CTTTGGAACT AGCTGCTCAG AGTGAGTATT GGGTAGAAAC CATGTGTAAC CTGGATTGGT
ATGCTGATTC ATGATTGTAG CTATGCAAGG AACCGGAAGA ATGGCTCTTC AAACAGGTTT
GCACCCCGCC CAATTGAAGG ACAGTGTCAC TAGTAAGCCC CATTCTCATT CTTCCCATTC
ATGCACCATG TTCTAATCAA TTCTTCAGCT CCCGGTGGAT GCACCATTGC CGGTTTGTTG
ACACTTGAAG ACGGCCGAGT GCGATCAACG ATGGCCCGAG CTATCCAAGT CGCCACTAAC
CAGTAAGTCT TATCTATTCT CTCTTTTCTC CGGAAATCTG CAGCTAACGG ATTTCAAAGT
GCTTCCGGCC TCGGACAAGA CAAGAAGTAA AGAAAGCAAA GGCTTTAGAG AACGGTGGTG
GTAGGACTAC GAAGCGGGAA AAAATGTGAT ACATTGCGGG CCCATCGATA TCATATGATA
GAGTTATTCA TGTACGCATC ATATTG
|
|---|
| Protein sequence | MGYTLAVLGC GTMGIAILSG VISSLETRAS LPRNPNASSE PPSGISTPTA SQFLDAPEAS
LPSTFIATVG REETGRKLRR TLADMGSIGK QVQVRAGQGN VKTVDEADVI LVCSKPQIAR
SILEEEGMSK ALEGKLLISI CAGVTISQLK SWVPESTRVV RAMPNTPCKI GEGMTIVTPL
SDALSRTLIL NIFTSCGRCR FLDEKHFDAC TALAGSGPAF VALVLEAMAD GGVMMGLPRS
EALELAAQTM QGTGRMALQT GLHPAQLKDS VTTPGGCTIA GLLTLEDGRV RSTMARAIQV
ATNHASGLGQ DKK
|
|---|
| |