Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF00710 |
Symbol | |
ID | 3258418 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | + |
Start bp | 232288 |
End bp | 233114 |
Gene Length | 827 bp |
Protein Length | 220 aa |
Translation table | |
GC content | 48% |
IMG OID | 638257195 |
Product | Golgi to vacuole transport-related protein, putative |
Protein accession | XP_571243 |
Protein GI | 58268174 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5030] Clathrin adaptor complex, small subunit |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCACG CCGTCCTAAT TTTCAACACC AACGGCAAAC CTCGTCTCTC CAAGTTTTTC ACCCCCCTCC CTCCACTCGT CCAGCAATCG CTCATCTCCC AGATCTTCTC ACTCATCTCC GACCGTCCTG CAGGGGTGTG CAACTTTCTA GATGCACCCG ATCTTGTGTT TCCCACGCCC AAGTCTATGG TAAAAACTAG GCAGGAGGAG AGGAATGGCC TGGGGTTGGA AGGCGGAAGG GATGGAGAAG AGGTGAAAGA GATGGAGGAC GATACGAGGG TGATTTACAG GCATTATGCG ACACTATACT TTGTTTTTGT GGTTGATGGA GCGGAAAGCG AGCTAGGTAT TTTGGACTTG ATTCAGGTGA GCTTGCACAC TCCCTTGTAA ATGTTCAGAG CTAACAAGTC TTATAGGTCT TTGTAGAGTC ATTAGATCGA GCCTTTGAGA ATGTGTGTGA ATTGGATCTG ATCTTTCACT TTGACGAAGT GGGTTCAATG CACAACCTAA CTATGTATCT CTTTGACCTG ATCATGCTTT ATAGGTATAT CATGTCCTAT CCGAAATAAT ACAAGGTGGA CTCGTGCTCG AGACAAATAT CAATGAAATA TCCGCCTGCG GTTCGCCCTT TTCGACCCTT ATACACTCTT GACTGAAACT GACCAAATTT TCCTGCAGTG CGTGCTGCCA CCAAGAACCG TAAAGAATCT TCTGCCTCTT CCAATCCACT CATACCGTCC GTCTTGGCAG CTCCCGGAGG AAGAGGTGGA AATAGAGGAG GAAGCGCCGA TGGTGCGAGG AGATGGTTGG CCGCTATGGG TGTTTAG
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Protein sequence | MIHAVLIFNT NGKPRLSKFF TPLPPLVQQS LISQIFSLIS DRPAGVCNFL DAPDLVFPTP KSMVKTRQEE RNGLGLEGGR DGEEVKEMED DTRVIYRHYA TLYFVFVVDG AESELGILDL IQVFVESLDR AFENVCELDL IFHFDEVYHV LSEIIQGGLV LETNINEISA CVRAATKNRK ESSASSNPLI PSVLAAPGGR GGNRGGSADG ARRWLAAMGV
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