Gene CNF00710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00710 
Symbol 
ID3258418 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp232288 
End bp233114 
Gene Length827 bp 
Protein Length220 aa 
Translation table 
GC content48% 
IMG OID638257195 
ProductGolgi to vacuole transport-related protein, putative 
Protein accessionXP_571243 
Protein GI58268174 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5030] Clathrin adaptor complex, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCACG CCGTCCTAAT TTTCAACACC AACGGCAAAC CTCGTCTCTC CAAGTTTTTC 
ACCCCCCTCC CTCCACTCGT CCAGCAATCG CTCATCTCCC AGATCTTCTC ACTCATCTCC
GACCGTCCTG CAGGGGTGTG CAACTTTCTA GATGCACCCG ATCTTGTGTT TCCCACGCCC
AAGTCTATGG TAAAAACTAG GCAGGAGGAG AGGAATGGCC TGGGGTTGGA AGGCGGAAGG
GATGGAGAAG AGGTGAAAGA GATGGAGGAC GATACGAGGG TGATTTACAG GCATTATGCG
ACACTATACT TTGTTTTTGT GGTTGATGGA GCGGAAAGCG AGCTAGGTAT TTTGGACTTG
ATTCAGGTGA GCTTGCACAC TCCCTTGTAA ATGTTCAGAG CTAACAAGTC TTATAGGTCT
TTGTAGAGTC ATTAGATCGA GCCTTTGAGA ATGTGTGTGA ATTGGATCTG ATCTTTCACT
TTGACGAAGT GGGTTCAATG CACAACCTAA CTATGTATCT CTTTGACCTG ATCATGCTTT
ATAGGTATAT CATGTCCTAT CCGAAATAAT ACAAGGTGGA CTCGTGCTCG AGACAAATAT
CAATGAAATA TCCGCCTGCG GTTCGCCCTT TTCGACCCTT ATACACTCTT GACTGAAACT
GACCAAATTT TCCTGCAGTG CGTGCTGCCA CCAAGAACCG TAAAGAATCT TCTGCCTCTT
CCAATCCACT CATACCGTCC GTCTTGGCAG CTCCCGGAGG AAGAGGTGGA AATAGAGGAG
GAAGCGCCGA TGGTGCGAGG AGATGGTTGG CCGCTATGGG TGTTTAG
 
Protein sequence
MIHAVLIFNT NGKPRLSKFF TPLPPLVQQS LISQIFSLIS DRPAGVCNFL DAPDLVFPTP 
KSMVKTRQEE RNGLGLEGGR DGEEVKEMED DTRVIYRHYA TLYFVFVVDG AESELGILDL
IQVFVESLDR AFENVCELDL IFHFDEVYHV LSEIIQGGLV LETNINEISA CVRAATKNRK
ESSASSNPLI PSVLAAPGGR GGNRGGSADG ARRWLAAMGV