Gene CNF00560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00560 
Symbol 
ID3258089 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp189079 
End bp191894 
Gene Length2816 bp 
Protein Length904 aa 
Translation table 
GC content49% 
IMG OID638257180 
Productexpressed protein 
Protein accessionXP_571473 
Protein GI58268634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.127311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAAA ATATCCTCGG TCTCCTTCTC GTCACTTCCT CTTCTCGCGG ACGTCACGTT 
TTTCGCTATC CTCCTGACCC GGCCTCTCCC AATGTCCGTC TTGCCCAGCC TATCTATCCA
TCTGCGACCT TCACAGCGAC AGAAGCAGAT GTCGAGTACA AACATCCACG TGCAGGTGGA
GTTGGCATGA GAAGGCGGCC ATTCGATGAT CGATCTTCGA ATGCTTCTAT AAGACGGTCA
TTATTTGGTC CGTCTACTCG AGGAAGTAGC AAGAACGAAA GGGATCGGAA GGGGAAGAAG
AAAGCGGATG ACCTGAGAGC GAGGTATATG AACCCTCTGG CGGAAGCTAA TGGGTCAGAT
TATGAAGATG AGGATTCTGA GCAGGACGAT TCAAGTTCTG ATGAACGAAG TGATTTCGAG
GTCATGTGGA AACCGGGCAC GACAAACGGC GCCAATGACG CTACTGGTAC CGGCCTTGCA
AAAGTTGCCC ATCGTCAAAC TAATGGCGAA GACGATCCAA GAGCATCAGG TGTGCGTAAT
CTCGACCCAT CACTAATAGA TCTATCAAGG CGAGGCTCGT CAAGTACCAC TACGGCCACT
GTTACCGGTG CCGATCGCAA TAATGACCAT GCGGACAAAG ATGCGAAAAA ATTAGCTATC
GAATCGCAAT ACAATTACGC TTTGGGATGG CCGCTTGAAG TTTTGGCCGA TATGCTGACG
CCTCCAAGAT CGGCGTGTAA CCGGCGATTC GAGCTTTGCG TTGGTAATGT TGTCTTTCTG
GGACATCCAG TATGTGCCAC CCCGGATGGG AAATGGGAAG CGCCCCCGGA TGAAGATGAG
CTGGAAGAAA GAGCACCTTC TAGGGGAAGG CGGATGAGGG ACCAAGGAGG AACGATGACC
AATCTCGATA CTGTCGATGA AGGGATCGAA GCTTATACTT CTGCCATCAC AAAGTTTGCG
AGTATCGAGT CGGAAACAAA GCGTTCAAGT CAATCCAACC ACAAGGATGA CGATGTTCCC
AACTTGACAA TGTTTCATCT CGTCCTCATC ATTGATAAAC CTGATCCCAA ACCCGGGACA
GAATCACATG ATGAGCATCA TAGCCAAACA ATGGGCATCT ATGATGAGAT CTATAGGGAG
ATTGCATTTA AATGGACAGC AGCTGCATAT AATCTGCAAT GCGAGAGTAA TTTGGTAGCG
AGAGAAGCCT GGATGATCGT CAAGTACAAG GAGAAATGCT TGAATGAAGG TGCGTCGCAA
TATCGTCTAT ATGAGACCGC ATCCATTACT GACAGTCTTC TAGGGATTGG AATTACCGAG
TGCTGTCGTT GGACAGCAAC ACATTGCCAC ATTGACCGCA CCCTCAACTA CCTCTACCTC
CGTCTTCACC AACTTCGTAC CCAGCCAGCT AACGGTCTCC ACTCTTACCT CCCTACCACC
ATCACCAACC GTCTGGCACA TATCACCATC CAAACCGTCT TATCTCCCAA GCCCGTTAAC
ACGGACGAAG CTTGGGCGCA TTGGGGAGAG ATGGAAGAGA TGCTGAGTGA CAAGGATAGC
GAAGAATCGT TGAGCGATTG GGAAGATGAT TGGGGAGCGG GAGCCATGAT GGGGATGAAG
AGGCCAGAGT TGATCGTGAA ACCCTGGCAG ACATTGTTAC TGATTGATGA GGATAAAAAT
CAGAACCAAG AAGCGTTGTT CTTTGGCATT GTAGGCTTAC CGGCGGCGGT CGATGATGAT
GATGCTGTGA ACAACTGGAC GAATGGCAGG AAATCTCCTG TGAGGAATAG GACGAGGAGA
GGGTCAAAGA TCACTGCTGA GGATGATGCA ATTGAGGATG GTGAGACAGT GTTGCGAAGA
ACTCTGATTG AAGCTTGCGA CGTCACCAAG CCGTGAGTTT CATCAACCTA TATTGTAGTT
CTGAGCTTAC AACCGTAAGA TTGTATGAGA TTGCCCATTT ACTGCGATAC GATCTTGAAG
GCGTTGTCAT CCCGCTTGCC AGAGACCTTG TTCAATCCAA AAAAGCCATC CTCATTGACG
TCGTCAACCC CCGTCTCCGT ACAGTTGTCA TGCCCACCAC CATCGACGAA CATAACTCTT
CTTTCGACCA GTACACCGCC CGTTTCGCCC GAGATTTCCC AGACTTGCCC CCTTTCCCGA
GGTTCATCTC AGCCATCTCC CTCTCCCCCA TCCCATTCCG AAAGGTGATT CCCAACCCTG
ATCCGGATCA TGCTACTAGG GAAAAATACA TGTCTGCTCT TCTGTGGTTG CTCAAACAAG
ACCTTGTCGT ACAAGTGCAT ACTCGTGCGA GGGTATTCGC CAAATCGGAG ATTAAAGTGG
AAGCTTGGAA GAGATTATGG TATAGGCGAA GACAGAGGTG GATAGAGATG ACAAAGGAAA
GATTAGAAAG AGAAAAGACG CTGGCTCGAT CACCCAGCGA TCAATCGGAT ATCCTCACTC
CGCGAGCAAG CGAGAATCAT ACCAACCCTC TTGACGCTAC CAGCTTCTCT TCACTCGGGA
CTACCCCCAT CGCCAACACA TTTACCGTAC CCCCTCCTAA CAGTAGCAGC AAGCTCGACC
ACTCATATAT GGATTACGAT CCAGCTCTGG AGATGGACAG TGATGAAGAA TTTGATGGGC
TTAATGGGCC GCAAAAGTTT TCCTTGGATG TAGCGCATCC GACGAAACAT GAGATACCCA
ACTTTGAACC ATCGTTCATC TTCAAACCCG CCAGGGCACA GAAGGATGAG GCGAGGTGGT
TAAGGGTGAT TAGGGAAAAG GCAGACGAGG TATGGGCAAG CAAATTTGAT CTGTAA
 
Protein sequence
MAENILGLLL VTSSSRGRHV FRYPPDPASP NVRLAQPIYP SATFTATEAD VEYKHPRAGG 
VGMRRRPFDD RSSNASIRRS LFGPSTRGSS KNERDRKGKK KADDLRARYM NPLAEANGSD
YEDEDSEQDD SSSDERSDFE VMWKPGTTNG ANDATGTGLA KVAHRQTNGE DDPRASGVRN
LDPSLIDLSR RGSSSTTTAT VTGADRNNDH ADKDAKKLAI ESQYNYALGW PLEVLADMLT
PPRSACNRRF ELCVGNVVFL GHPVCATPDG KWEAPPDEDE LEERAPSRGR RMRDQGGTMT
NLDTVDEGIE AYTSAITKFA SIESETKRSS QSNHKDDDVP NLTMFHLVLI IDKPDPKPGT
ESHDEHHSQT MGIYDEIYRE IAFKWTAAAY NLQCESNLVA REAWMIVKYK EKCLNEGIGI
TECCRWTATH CHIDRTLNYL YLRLHQLRTQ PANGLHSYLP TTITNRLAHI TIQTVLSPKP
VNTDEAWAHW GEMEEMLSDK DSEESLSDWE DDWGAGAMMG MKRPELIVKP WQTLLLIDED
KNQNQEALFF GIVGLPAAVD DDDAVNNWTN GRKSPVRNRT RRGSKITAED DAIEDGETVL
RRTLIEACDV TKPLYEIAHL LRYDLEGVVI PLARDLVQSK KAILIDVVNP RLRTVVMPTT
IDEHNSSFDQ YTARFARDFP DLPPFPRFIS AISLSPIPFR KVIPNPDPDH ATREKYMSAL
LWLLKQDLVV QVHTRARVFA KSEIKVEAWK RLWYRRRQRW IEMTKERLER EKTLARSPSD
QSDILTPRAS ENHTNPLDAT SFSSLGTTPI ANTFTVPPPN SSSKLDHSYM DYDPALEMDS
DEEFDGLNGP QKFSLDVAHP TKHEIPNFEP SFIFKPARAQ KDEARWLRVI REKADEVWAS
KFDL