Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNF00560 |
Symbol | |
ID | 3258089 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006691 |
Strand | - |
Start bp | 189079 |
End bp | 191894 |
Gene Length | 2816 bp |
Protein Length | 904 aa |
Translation table | |
GC content | 49% |
IMG OID | 638257180 |
Product | expressed protein |
Protein accession | XP_571473 |
Protein GI | 58268634 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.127311 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAA ATATCCTCGG TCTCCTTCTC GTCACTTCCT CTTCTCGCGG ACGTCACGTT TTTCGCTATC CTCCTGACCC GGCCTCTCCC AATGTCCGTC TTGCCCAGCC TATCTATCCA TCTGCGACCT TCACAGCGAC AGAAGCAGAT GTCGAGTACA AACATCCACG TGCAGGTGGA GTTGGCATGA GAAGGCGGCC ATTCGATGAT CGATCTTCGA ATGCTTCTAT AAGACGGTCA TTATTTGGTC CGTCTACTCG AGGAAGTAGC AAGAACGAAA GGGATCGGAA GGGGAAGAAG AAAGCGGATG ACCTGAGAGC GAGGTATATG AACCCTCTGG CGGAAGCTAA TGGGTCAGAT TATGAAGATG AGGATTCTGA GCAGGACGAT TCAAGTTCTG ATGAACGAAG TGATTTCGAG GTCATGTGGA AACCGGGCAC GACAAACGGC GCCAATGACG CTACTGGTAC CGGCCTTGCA AAAGTTGCCC ATCGTCAAAC TAATGGCGAA GACGATCCAA GAGCATCAGG TGTGCGTAAT CTCGACCCAT CACTAATAGA TCTATCAAGG CGAGGCTCGT CAAGTACCAC TACGGCCACT GTTACCGGTG CCGATCGCAA TAATGACCAT GCGGACAAAG ATGCGAAAAA ATTAGCTATC GAATCGCAAT ACAATTACGC TTTGGGATGG CCGCTTGAAG TTTTGGCCGA TATGCTGACG CCTCCAAGAT CGGCGTGTAA CCGGCGATTC GAGCTTTGCG TTGGTAATGT TGTCTTTCTG GGACATCCAG TATGTGCCAC CCCGGATGGG AAATGGGAAG CGCCCCCGGA TGAAGATGAG CTGGAAGAAA GAGCACCTTC TAGGGGAAGG CGGATGAGGG ACCAAGGAGG AACGATGACC AATCTCGATA CTGTCGATGA AGGGATCGAA GCTTATACTT CTGCCATCAC AAAGTTTGCG AGTATCGAGT CGGAAACAAA GCGTTCAAGT CAATCCAACC ACAAGGATGA CGATGTTCCC AACTTGACAA TGTTTCATCT CGTCCTCATC ATTGATAAAC CTGATCCCAA ACCCGGGACA GAATCACATG ATGAGCATCA TAGCCAAACA ATGGGCATCT ATGATGAGAT CTATAGGGAG ATTGCATTTA AATGGACAGC AGCTGCATAT AATCTGCAAT GCGAGAGTAA TTTGGTAGCG AGAGAAGCCT GGATGATCGT CAAGTACAAG GAGAAATGCT TGAATGAAGG TGCGTCGCAA TATCGTCTAT ATGAGACCGC ATCCATTACT GACAGTCTTC TAGGGATTGG AATTACCGAG TGCTGTCGTT GGACAGCAAC ACATTGCCAC ATTGACCGCA CCCTCAACTA CCTCTACCTC CGTCTTCACC AACTTCGTAC CCAGCCAGCT AACGGTCTCC ACTCTTACCT CCCTACCACC ATCACCAACC GTCTGGCACA TATCACCATC CAAACCGTCT TATCTCCCAA GCCCGTTAAC ACGGACGAAG CTTGGGCGCA TTGGGGAGAG ATGGAAGAGA TGCTGAGTGA CAAGGATAGC GAAGAATCGT TGAGCGATTG GGAAGATGAT TGGGGAGCGG GAGCCATGAT GGGGATGAAG AGGCCAGAGT TGATCGTGAA ACCCTGGCAG ACATTGTTAC TGATTGATGA GGATAAAAAT CAGAACCAAG AAGCGTTGTT CTTTGGCATT GTAGGCTTAC CGGCGGCGGT CGATGATGAT GATGCTGTGA ACAACTGGAC GAATGGCAGG AAATCTCCTG TGAGGAATAG GACGAGGAGA GGGTCAAAGA TCACTGCTGA GGATGATGCA ATTGAGGATG GTGAGACAGT GTTGCGAAGA ACTCTGATTG AAGCTTGCGA CGTCACCAAG CCGTGAGTTT CATCAACCTA TATTGTAGTT CTGAGCTTAC AACCGTAAGA TTGTATGAGA TTGCCCATTT ACTGCGATAC GATCTTGAAG GCGTTGTCAT CCCGCTTGCC AGAGACCTTG TTCAATCCAA AAAAGCCATC CTCATTGACG TCGTCAACCC CCGTCTCCGT ACAGTTGTCA TGCCCACCAC CATCGACGAA CATAACTCTT CTTTCGACCA GTACACCGCC CGTTTCGCCC GAGATTTCCC AGACTTGCCC CCTTTCCCGA GGTTCATCTC AGCCATCTCC CTCTCCCCCA TCCCATTCCG AAAGGTGATT CCCAACCCTG ATCCGGATCA TGCTACTAGG GAAAAATACA TGTCTGCTCT TCTGTGGTTG CTCAAACAAG ACCTTGTCGT ACAAGTGCAT ACTCGTGCGA GGGTATTCGC CAAATCGGAG ATTAAAGTGG AAGCTTGGAA GAGATTATGG TATAGGCGAA GACAGAGGTG GATAGAGATG ACAAAGGAAA GATTAGAAAG AGAAAAGACG CTGGCTCGAT CACCCAGCGA TCAATCGGAT ATCCTCACTC CGCGAGCAAG CGAGAATCAT ACCAACCCTC TTGACGCTAC CAGCTTCTCT TCACTCGGGA CTACCCCCAT CGCCAACACA TTTACCGTAC CCCCTCCTAA CAGTAGCAGC AAGCTCGACC ACTCATATAT GGATTACGAT CCAGCTCTGG AGATGGACAG TGATGAAGAA TTTGATGGGC TTAATGGGCC GCAAAAGTTT TCCTTGGATG TAGCGCATCC GACGAAACAT GAGATACCCA ACTTTGAACC ATCGTTCATC TTCAAACCCG CCAGGGCACA GAAGGATGAG GCGAGGTGGT TAAGGGTGAT TAGGGAAAAG GCAGACGAGG TATGGGCAAG CAAATTTGAT CTGTAA
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Protein sequence | MAENILGLLL VTSSSRGRHV FRYPPDPASP NVRLAQPIYP SATFTATEAD VEYKHPRAGG VGMRRRPFDD RSSNASIRRS LFGPSTRGSS KNERDRKGKK KADDLRARYM NPLAEANGSD YEDEDSEQDD SSSDERSDFE VMWKPGTTNG ANDATGTGLA KVAHRQTNGE DDPRASGVRN LDPSLIDLSR RGSSSTTTAT VTGADRNNDH ADKDAKKLAI ESQYNYALGW PLEVLADMLT PPRSACNRRF ELCVGNVVFL GHPVCATPDG KWEAPPDEDE LEERAPSRGR RMRDQGGTMT NLDTVDEGIE AYTSAITKFA SIESETKRSS QSNHKDDDVP NLTMFHLVLI IDKPDPKPGT ESHDEHHSQT MGIYDEIYRE IAFKWTAAAY NLQCESNLVA REAWMIVKYK EKCLNEGIGI TECCRWTATH CHIDRTLNYL YLRLHQLRTQ PANGLHSYLP TTITNRLAHI TIQTVLSPKP VNTDEAWAHW GEMEEMLSDK DSEESLSDWE DDWGAGAMMG MKRPELIVKP WQTLLLIDED KNQNQEALFF GIVGLPAAVD DDDAVNNWTN GRKSPVRNRT RRGSKITAED DAIEDGETVL RRTLIEACDV TKPLYEIAHL LRYDLEGVVI PLARDLVQSK KAILIDVVNP RLRTVVMPTT IDEHNSSFDQ YTARFARDFP DLPPFPRFIS AISLSPIPFR KVIPNPDPDH ATREKYMSAL LWLLKQDLVV QVHTRARVFA KSEIKVEAWK RLWYRRRQRW IEMTKERLER EKTLARSPSD QSDILTPRAS ENHTNPLDAT SFSSLGTTPI ANTFTVPPPN SSSKLDHSYM DYDPALEMDS DEEFDGLNGP QKFSLDVAHP TKHEIPNFEP SFIFKPARAQ KDEARWLRVI REKADEVWAS KFDL
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