Gene CNF00550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00550 
Symbol 
ID3258490 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp186801 
End bp187775 
Gene Length975 bp 
Protein Length239 aa 
Translation table 
GC content47% 
IMG OID638257179 
ProducttRNA specific adenosine deaminase, putative 
Protein accessionXP_571237 
Protein GI58268162 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00012286 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGAAG CTCTGATCAT GGTGAGCGTC CATTATCTGG GCCTTAGAGT GTGGATAACT 
GACTGCTGGT GGTTTCCACC TGGCAGGCGG AAGAAGCTCT TACAAATGAC GAAGTTCCTG
TGGGATGTGT ATTCGTGAAA GGCGGACAAG CTATTGCCAG AGCCCGGAAC AGAACTAACG
AATGGAGAAA TGTAAGTTCA TTCTTATCCG TACACATTTA TTTCTCAAGG ACGCACAACT
AAGACTGAAA ACTGTTTGGT TCGTTAGGCT ACACTCCACG CCGAACTCGA AGCTATTGAT
CATCTTCTCC CCTCCCATCC CGCGCCCTTA TCGACTATAA CGTTGTATGT CACCGTGGAA
CCTTGTGTGA TGTGCGCCTC TGCACTGAGG CAGGTAGGAA TTGGAAGAGT AGTATATGGT
TGTGGGAATG ATAGATTTGG AGGATGTGGA AGCGTTATTC CTGTGAACAA CTCGTAAGTC
AAACAGGAAT TTGGCACTAT GAGACATTAG CTGATGGGGA GATTATTCAG ACCAAGGCTG
GATTCACATC CGGCATATGT GGCCGTTGGA GGGTTTTACC GTGAAGAGGC TATTATGCTT
TTACGGCGAT TCTACATGTC CCAAAATCCC AATGGTGTGT CTTTCAAACT TTTTAGTCAA
AATCTGCTGG CTAACAGATA CATGGTTACA GCACCAAAAC CCAAAAAGAA GGCAACCCGA
GTTCTCAAAA CCGATATCCC TCCGCCTCCT TCCAGAAATA CAACTCCACA ATCTTCCCGT
CCGTCTTCTA CTGTCCCTTC ACAACGTCGG CCAGTTCCTT CCACAGATGC TAGCACAACA
GGGACGTCAA CACCCATTTT GTCTGAAGGA GAGAATAAGT TGCGGGAACA GGTTATGAGA
GATGATGGGT TACCGATTGG GTCTACGATG GTTAGCACAC CTAATGAGAC GCCCGTTCCC
CAGGAACGGA AATAG
 
Protein sequence
MREALIMAEE ALTNDEVPVG CVFVKGGQAI ARARNRTNEW RNATLHAELE AIDHLLPSHP 
APLSTITLYV TVEPCVMCAS ALRQVGIGRV VYGCGNDRFG GCGSVIPVNN SPRLDSHPAY
VAVGGFYREE AIMLLRRFYM SQNPNAPKPK KKATRVLKTD IPPPPSRNTT PQSSRPSSTV
PSQRRPVPST DASTTGTSTP ILSEGENKLR EQVMRDDGLP IGSTMVSTPN ETPVPQERK