Gene CNF00220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00220 
Symbol 
ID3258313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand
Start bp67790 
End bp69274 
Gene Length1485 bp 
Protein Length345 aa 
Translation table 
GC content48% 
IMG OID638257143 
Productexpressed protein 
Protein accessionXP_571292 
Protein GI58268272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.456156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTGACTTCAG TGAGCATCTG ATTGAGCTAG GATTGCTCGA AGCTGGATTT GTACTAGGGA 
AGTAAGTGGC GCAGCCTATC TATGGCTTTA CTACTCTACG ATCCCTGCCA CAAAGCACCC
AATCAACTGG TGATTTAACC ATACTGTCTC AAGCAGCTTT TTCCGTACGT CACTTCCATC
TCGGTCGGTT TGTATTCGTT TCTCTAGATT AGCAATACAG GTAACTGATG CCCAGTAGCA
TATATTCGCT TGAGTCCACT CATTAACATC TATCTATACC TATCTATGCC ATGTCTCAAG
CATTTACCAC ATCTGAAGAA CCTGTCTTCG AGACCCTCTA TCCCGTCGCC CATCTTATCC
TCCACCAGCT CTCCCTCATC GCGCCCCTAA AAACCCTGAC GCTCTCCAAA TATTATTATA
AGCACACCAT ACCCACCCTC TACCACACCG TCACCGTCTG CCACAAGCTT TTCCACAGTC
TTAGCCAGCA CAGTACTGTT GAAGCATGGC TCCGCACTGC TGAGGCACTG TCCCGTACAC
GAATTCTGCT CATACGGAGC ATGGAGAGCG CCGTGGTTTC CACTCATTTC AATATTTCAA
GTTGTCCTGA TCCTATCGCC GCCCTAGAAT GGCCAGTGAA GAACTTGTTT TCAAATGTCA
AACGGTTGGA GTACGATTGG GAAGTCGTCA ATAGCCAATT CTTGAACAGA TACTCGGTAT
GCTATACTTC TCAAAACGTG GACAACACTC TCATCCGTCT CCTCCCCTCC AGCTTCCAAG
AAACGGTCGC TCATGTACTC TTTGATGGAA GGGCAAGGTA TCATTACGTC CTAGATGAAC
TTCGACGAAT CGCAGAGTGT CGTCCGCAAA TGACAACAGT CATTTTTCAC ACCCCATCCA
ACAACCAAGT GCCGCTCCGA AGCGCAATCA TGCAGCTACC GTTTATTTGG CCCTACAGCC
GTATCCGAAT TATCATCTCC CTTATCAACG CACCCTATGA TACCAAATGT CCCCGATGGG
AGGATGAGGA CCTGATGTCC CTAGTGTGTG GGGTATGGAA GAGCGCGGTA GCGCTTGATA
ATGTAGTGTA CAAAGCAAAG ACGTCTGCCA GCATTGCGCT GGGACCTGTG GTGAATAAGA
TGGAGATATA TATGTCTCAG GCGGAGGAAG CGGAAGCATT GTTTGCGCGA TTATATTCGG
AGAGCCCGGA ACCGCCGAGG TTTATGTCAA GGATTGAGAA TGTTACCTGG AACGACTTTG
CGGAGGAGTA TATCGACTTT GTAGAACTGA GTGAAGATGT GTTAGGGATA TACGGACTGC
TTGAGTGAGA GTTCAACGAG CGAAAAGCAG TATCGTACGC ATATCGTGAC TGAAGCTTTG
AACAACAGAG CCAGTCACAA TAACGACATG GAACGATGAA GCACGACAGC CGCAAAATAG
AAATATACAT ACATTCATAT AAACATGCAT ACACGTGCAA CCCCC
 
Protein sequence
MSQAFTTSEE PVFETLYPVA HLILHQLSLI APLKTLTLSK YYYKHTIPTL YHTVTVCHKL 
FHSLSQHSTV EAWLRTAEAL SRTRILLIRS MESAVVSTHF NISSCPDPIA ALEWPVKNLF
SNVKRLEYDW EVVNSQFLNR YSVCYTSQNV DNTLIRLLPS SFQETVAHVL FDGRARYHYV
LDELRRIAEC RPQMTTVIFH TPSNNQVPLR SAIMQLPFIW PYSRIRIIIS LINAPYDTKC
PRWEDEDLMS LVCGVWKSAV ALDNVVYKAK TSASIALGPV VNKMEIYMSQ AEEAEALFAR
LYSESPEPPR FMSRIENVTW NDFAEEYIDF VELSEDVLGI YGLLE