Gene CNF00040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNF00040 
Symbol 
ID3258097 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006691 
Strand+ 
Start bp7613 
End bp8297 
Gene Length685 bp 
Protein Length146 aa 
Translation table 
GC content51% 
IMG OID638257123 
Productmitochondrion protein, putative 
Protein accessionXP_571273 
Protein GI58268234 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0979015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCCTTCGTAT CCAAAATGAG CGTGCGTAGA CTCGTATAAC GTTTCAGCAC TACGGAAATG 
CAATGACATA CTGACCCCCA CATGCAGCTT TCACGAACTT TCCTCCGTCA ACTCCGGCCC 
GCCTCTTCTT CTCGAGTCGT CCTCCGATCC TTCTCCAGCT CCCGATCCAC TTTCTCCGAG 
ACCCCTGCTG GCGACGCCCC AGTTAACCCA AAGATTGCCC CCATAGTTGA CAGCATCTCT 
TCTCTGAGCT TATTGGAGGT TTCAGAACTT GTTACTGCCC TTAAGGTGCG CCCATTTCCT 
TCTCGAATCG CCCATTTTGG CCGTTAGTCT CATCGCATTA CCATAGACGA AACTCAACAT 
TACTGAAATT TCCCTCCCTG CTGCCTCTTC CCCCGCCTCC GCTGCTGCTT CCTCGACATC 
GTCCGAAGCC CCTGTTGAAG AGAAGCCCAA GGAGAAGACA ATTTTCACCG TCAAGCTCGA 
GAAATTCGAT GCGGCCGCTA AGGCGAAGAT CATCAGGGAG GTCAAGGCTC TCATGCCTAA 
TATGAACTTG GTTGAGGTGA GTTAGAGGCT ACGAGCCCAA ACGAACAATA CTGGAGAGCG 
AATGAAGAGG AAATGAGAGT GAGCGGAGTG TATCGGAGAA AATGACAACC AGGGACAGCT 
AAGGAGAGTA GAAGAGAAAG AATGA
 
Protein sequence
MSLSRTFLRQ LRPASSSRVV LRSFSSSRST FSETPAGDAP VNPKIAPIVD SISSLSLLEV 
SELVTALKTK LNITEISLPA ASSPASAAAS STSSEAPVEE KPKEKTIFTV KLEKFDAAAK 
AKIIREVKAL MPNMNLVELR RVEEKE