Gene CNE04620 details

Gene Information

• Locus tag: CNE04620
• ID: 3257786
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 1291671
• End bp: 1293645
• Gene Length: 1975 bp
• Protein Length: 526 aa
• GC content: 51%
• IMG OID: 638257046
• Product: mitochondrial processing peptidase, putative
• Protein accession: XP_571156
• Protein GI: 58268000
• COG category: [R] General function prediction only
• COG ID: [COG0612] Predicted Zn-dependent peptidases

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.261282
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGGAAAGGT AACGAAAACA GCACGAACAA CAATGATGAG GATACCAGCA GCCCCCCGCT 
TCGCTTCAAA AGCGAGCACC AGCTCGAGAC TGCTAGTGCC TTCCCGACGG GCCACAACAG 
CCGCCACTTC TTCCGCTCAC GTATGTCCTA CCATGCTCGA AAGAAACATA TTGCTTATCC 
ACCTTGTTGT AGACATTGAA CCCTGCTGGA ACGGTCACAA CACTTCCTAA CAAACTTCGT 
GTTGCTACCG AGTCTATTCC TGGGCATTTC CACGCTGTGG GAGTCTACAT CGATGCCGGT 
AGTCGATATG AAAGTCAGAG GACTAGTGGC GTATCCCATC TTTTGGACAG ACTGGCTTTC 
AAGGTGATTC ACAAAATTGT TGTTTCTTAA ATCTCGAATG CTAATGCTGT ATAAAACCTT 
AGAGCACAGA CAAGCATACT GATGCCCAGA TGACCACCCT CATCGACTCT TTGGGTTCAC 
AAGTTACTTG TGCTTCTTCC CGTGAGACCA TCATGTACCA GTCAACCGTT TTCCCCCAGT 
CTCTCCCTCT CGCATTCGAA CTCATCTCTT CCACTATCCG ACACCCTCTC CTCCTCCCAG 
AAGAGCTTTT GGCGCAAAAG GAGGCTGCTG CGTATGAGAT TCGGGAAATC TGGGCGAAGC 
CGGAATTGAT CTTGCCGGAA ATATTGCATA CCGTCGCTTT CCGGGACAAC ACCCTTGGTA 
TGCCCCTGCT CTGTCCTGAG AGTCAGTTGG GCGTGCTTGG AGAGGAGGAA GTTAGAGGAT 
TTATGAGGGA CTGGTACCGA CCAGAGAGGA TGGTGGTTGC TGGTGTCGGT ATGCCGCACG 
AAGAACTCGT CATGCTTGCC GAAAAGTTCT TCGGAGACAT GCCCGCTACC ACTACCAGCC 
CTGGATCTCT CCACCCCTCT GTTACTCAAG CGCAACAGCC TTTGGGGAGT AAATCGTTTG 
CGACCGCGTC TGCTTTGCCC GTCTCTCAAG ATTACACCGA CCTCGCGCAC GCTAAAGCCC 
AGTATACCGG CGGCGAGCTT TACATGGAAA AGCCAGAAGA AGAATTTGTC CATATTCACA 
TTGGCTTCGA AGGATTGGGA ATTCATGATC CTGATATCGT GCGTCTGTTG GCTATTGCTC 
CTTCTCCATC GCTGACGTGC ATCTTCATTA TAGTATGCTC TCGCGACCCT TCAAACTCTG 
CTGGGCGGAG GCGGCTCCTT CTCCGCCGGA GGGCCAGGTA AAGGCATGTA CACCCGCCTC 
TACACAAAAG TTCTGAACCA ATACCACGCC GTTGATTTCT GTGCCGCCTT TCACCACTGT 
TACGCTGATT CCGGCCTGTT CGGCATCTCA GCCTCTGTGT ATCCCCAATT CGCGTCTAGG 
ATAGTTGATG TCATGGCGGG ACAACTGCAT GCGTTGACGG GACCCATGTT TGGTGGTGTG 
GAGGAGAAGG AGGTGAGGAG GGCAAAGAAT ATGTTGAAGA GTACTTTGGT CATGGCGCTG 
GAGAGTCGCT TGACTGCCGT CGAAGGTACG TGTCTTTATA CTTTACTCTC TCTTTCCGCC 
CAGATTCCCC ATAACTTACC ATTCACTCCT CTCCATTTCC ACTCATTATA GATCTCGGTC 
GTCAAGTACA GATCCACGGC CACAAGGTCC CTGTCGAAGA CATGTGCGCC AAGATCGATG 
CGCTCACTAT GGCGGACCTC CACCGCGTCG CAAACCGTAT TTTAAGACCG GGCAACTCGT 
CAGAAGGGAG GGTGAATTAC GGATTAGGAT CGGGCAAGGC GACGGTAGTG GCGCAGGGAC 
CAGGATTGGG TGCGTTGGGC GACGTGAGAC GGATACTGAA GGATAGGTGG GTGTTGGGTG 
TGTAAAAATG AATGGAAGGT TAGAGTAGTG GAAGTGGAAT AGAGAAACAG GGAAGAGGCA 
TTTTTGTATT ACTAGACTTG GTAATCAATC AGCATGAATG ACCACCGATC AAACA 

 

Protein sequence

MMRIPAAPRF ASKASTSSRL LVPSRRATTA ATSSAHTLNP AGTVTTLPNK LRVATESIPG 
HFHAVGVYID AGSRYESQRT SGVSHLLDRL AFKSTDKHTD AQMTTLIDSL GSQVTCASSR 
ETIMYQSTVF PQSLPLAFEL ISSTIRHPLL LPEELLAQKE AAAYEIREIW AKPELILPEI 
LHTVAFRDNT LGMPLLCPES QLGVLGEEEV RGFMRDWYRP ERMVVAGVGM PHEELVMLAE 
KFFGDMPATT TSPGSLHPSV TQAQQPLGSK SFATASALPV SQDYTDLAHA KAQYTGGELY 
MEKPEEEFVH IHIGFEGLGI HDPDIYALAT LQTLLGGGGS FSAGGPGKGM YTRLYTKVLN 
QYHAVDFCAA FHHCYADSGL FGISASVYPQ FASRIVDVMA GQLHALTGPM FGGVEEKEVR 
RAKNMLKSTL VMALESRLTA VEDLGRQVQI HGHKVPVEDM CAKIDALTMA DLHRVANRIL 
RPGNSSEGRV NYGLGSGKAT VVAQGPGLGA LGDVRRILKD RWVLGV