Gene CNE03900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE03900 
Symbol 
ID3257486 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp1109606 
End bp1111247 
Gene Length1642 bp 
Protein Length439 aa 
Translation table 
GC content48% 
IMG OID638256973 
Productexpressed protein 
Protein accessionXP_571014 
Protein GI58267716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCAATACTTA TAAGATTTCC TTAAATACCA TATCACGTTC ATTATCCCAC GTTCCTTCTT 
CCATAACAGC AGTCGAGCAG CAACCGCTAC CAACGGATTA ACCCTCTCCA TCCCAATACC
CAGCCGTCCC AATTCCACAA AGCCTCCAAC AACAATAAAG CCAGGGGAAA ATGTTCTTCA
AGACCGTCCC CCTCCTCTTG CTGCTCGTTT CCCCATTCCT TCCTTCTTCT CTTGCAGACC
CGACCGAAGT TGACTGCCCT GACACCGACC TGGCGACCTA CCTCATCTCC CTTATCAATG
TCCTGTACTA CAACGGCCTT ACCATCTCCG AAGAGCTTAT CGTTCATCTC TCCGAAACTG
ACGAGGGTTA CGAGTTGCTG GAGGATCTTT ACATGAACGC AGATATCTGG ACATTTTTGG
CTCCTACAGA CGAAGCATGG CAGACAGCGA ACATTTGGCC ACCATTCTCT TCAATGACAG
ACCACTGGGG TGCGGATCTC CTGGCGCTAC ACTCACTTCA AGGCGAATAC TCACCATCGT
CCGTGCCATC TCAAGGTGCA GAAGTGGCGT CTACTTACCT CGAAATGAAA GATGAGATGA
ATGCGACGAG TTCAAATAGT CAGGCGTATC AAGCGGTGGT ATTGTACCAA GGAGATAACG
GAGGCCTGGT AGTAGATGGC TGGTGGGGAA ATGCCACGAG TTGGAATGGA TTCGTCGACA
CGAGTAGCAG CTTGGGTCTG GGGAATCTGG AAATTCTTCC CATCGATTAT GTGGGTTTCC
TCTTTCTGTT ACGTATGACA ACTAAGATAT GATGCAGGTT CTTGCCTTTC CTCCTAGCCT
CTCCGAAGCT TTTGCTACTT CAGGTTTATC CAACATGTCA TCAGCCATTG AGGTCATAGG
CATGACAGAT GAGCTTCAGC AACTTACTGA TAATGGATTC ACCATCTTTG CACCTATCGA
CTCTATCTGG AGCGATGAAG CCAAGAGTAT GATGACGAAT GATAGTACTG CAGTGCCGTT
AGTTAAGAAC CACGTAAGTC AAGATCATTA CATTGAAAGA GCTTAGTTGA CAAGAAGGGG
TAGTATACAA CTAGTTACTC GTTATTTTCG CCTATGTGGG CTTCATCTGG GTCTTTTGAT
CTCCAAGTTG AGTCTGGAGA GGTCCTTACA ATCAAGGTTG ACGATGATGG AGGCTATTCG
GTCGTCCTTG GAGATGTGGA AGCAAAGATC ATCAAGTCAG ATATTACCCT TGAGAACGGA
ATCATGCACG TAAGTCCCTT TTTTCGAAGT AAGCAAGAAA GAGCATAGAC TGAACACCAT
GTAGGTAATT GATGCAGTTC TCCTCTCACC AGATAGCATC ATGTCCAGTG CTGGTGTGAC
ATCCTCTGAC GGGGTAGTGG CTGTCCAAAC GGGTTTATCT TCGGGATCCA GTTCTTCAAG
CGCCTCAGGT TCTCTCGGTT TGTCTAGTGC TGAAGGTATC GACTCAACAG GTTGGGCAAG
CACGACGACA GGGACGAATA CGAGCAAGCA GGTGGTTAGC GAACAGCAGA ACAGCAGAGC
CGGGAGAAGA ACAGCGGTTG GTGTGCCACT GTTCATGGGT TTGATGTTTG TGCGCGAACT
TGCTTTATTA TCACAGCTGT AA
 
Protein sequence
MFFKTVPLLL LLVSPFLPSS LADPTEVDCP DTDLATYLIS LINVLYYNGL TISEELIVHL 
SETDEGYELL EDLYMNADIW TFLAPTDEAW QTANIWPPFS SMTDHWGADL LALHSLQGEY
SPSSVPSQGA EVASTYLEMK DEMNATSSNS QAYQAVVLYQ GDNGGLVVDG WWGNATSWNG
FVDTSSSLGL GNLEILPIDY VLAFPPSLSE AFATSGLSNM SSAIEVIGMT DELQQLTDNG
FTIFAPIDSI WSDEAKSMMT NDSTAVPLVK NHYTTSYSLF SPMWASSGSF DLQVESGEVL
TIKVDDDGGY SVVLGDVEAK IIKSDITLEN GIMHVIDAVL LSPDSIMSSA GVTSSDGVVA
VQTGLSSGSS SSSASGSLGL SSAEGIDSTG WASTTTGTNT SKQVVSEQQN SRAGRRTAVG
VPLFMGLMFV RELALLSQL