Gene CNE03880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE03880 
Symbol 
ID3257505 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand- 
Start bp1106123 
End bp1106885 
Gene Length763 bp 
Protein Length134 aa 
Translation table 
GC content49% 
IMG OID638256971 
Productconserved hypothetical protein 
Protein accessionXP_571010 
Protein GI58267708 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5078] Ubiquitin-protein ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGACT CTCCTCCCGG TATCTCCGCT GCTCCTAAAG ATGACAATCT CCGACATTTC 
GACGTGACTG TTGCCGGTCC CGACTCTTCT CCATATGAAG GTGAGTTCTA CCCCCCCTTG 
TCATTGCATT TTGTTGTGAG AACGATGGGA TAAACGAGTA GGGACGTCAT GGAGGCTGAT 
CATGTTTGTT CGCGGCCTTA TCCTGCGATC TGCGTGAACA GGTGGTGTTT TCAAGCTTGA 
ACTGTTCTTG CCGGAAGAAT ATCCCATGAA TCCCCCGAAA GTCCGATTTT TGACCAGGAT 
ATAGTGAGTT TCATTGTATC GTATTGGTCA TCGCTTGCTG ATTCATTCCA CCTAGCCACC 
CAAATATTGG TATGTCTATG CGCCCTCTGT AGCTATCCCC TATCAACCAA AGAAACACAT 
TTTAACTGCT CTGAACTATA GACAAGCTCG GCCGAATCTG TCTTGATATC CTCAAAGACA 
AGTGGTCCCC TGCTCTTCAA ATTCGAACCG TCCTGTACGT CTATCTCCTC ATATCACTAA 
ACTCTGCGTC TGCTCACGCA TCCCTCATAG CCTCTCTATT CAGGCTCTTC TCGGTGCTCC 
CAACCCCGAC GACCCCCTTG CCAATGATGT TGCCCAGCAC TGGAAGGAGA ACCAGAATGC 
TGCCATCGCC CAAGCCAGAG AATGGACTCG AAAGTATGCT CAGTAGTAGT GTCTGTAGCT 
ATTAGAATGT TTCCTTAGGG ACTGGTGTAG ACTTCTAAGG TCA
 
Protein sequence
MADSPPGISA APKDDNLRHF DVTVAGPDSS PYEGGVFKLE LFLPEEYPMN PPKVRFLTRI 
YHPNIDKLGR ICLDILKDKW SPALQIRTVL LSIQALLGAP NPDDPLANDV AQHWKENQNA 
AIAQAREWTR KYAQ