| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE03640 |
|---|
| Symbol | |
|---|
| ID | 3257717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | - |
|---|
| Start bp | 1032488 |
|---|
| End bp | 1033474 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638256947 |
|---|
| Product | ER to Golgi transport-related protein, putative |
|---|
| Protein accession | XP_570935 |
|---|
| Protein GI | 58267558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.861507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGGC CCTCGTCAAC CTCCACTCAT GTCGCAGTTG TGCCCACAGT CCCACAAGTC
CTTCATATCC TCGCAAACCC TCCTCCGACT CTCATAGATG CGCAATTACC TGGCTATCTC
TTACCTCCTA CCTTCAACTT GCTACGCGAA TCCTCGGCCC ATGTAGTCAG AAAGAAGAAG
AGGGAAGAGG ATGAGCTGAG AAATGAGGGA CTATTACCGC CTCTGAATGA GAAAGATGTC
AAAGACGAGA GCAGGCTGAT AGAAGAAGAG CTGTCGAAAA GAATTGTGAG GATTGGTCTA
ATGGTCGGTG GATTCATTGC CGAAAAGTGA GCGTCGCTTC CGGCCATAGA GGATGCCCTA
ACGCCGAAAC AGATTGACAT TGGCGAGACC ACCCATATCT GCTCATCTGG ATATAATCAA
GTTCATTTGC AAAGACCTCT TCCTCTACGT GTATTCCAAA CAGATTGACA ACCTTCGAAC
AAATCATCGA GGCGTCTACG TTTTGCAATC GAATGCGTTC CCTCCACTTG TGCCTTTATC
ATCGTACAAA GGTAGTGCTG CAGATATGGA TGCAGCCAAC ACAGTACGTA GCATGCTATA
AGCTGACGTA GCGAAGACTG ACATGTAGAT AGCATCTCAT CTTCCCTCAA GCTCTTATAC
AAGGTGCTCT TCACAGGTTA GGCATGAATG CTGTCGTATC CGCCGAATCG TCCTCCCTCC
CACAATGTAC TTTCCAAATC CGCACGCTAA AACCATCAAA CATTCCCAGT ACACCGATGA
GTGGGACGCC CAACCCGCAA CCGACAACCC AGAGGCAGGC GCCGGTATCG GTTTCAGCTG
GCGGATATGG ACAGGCGGCG CCTGGCAGCC CAGCAATGAA CGTTACTGGG AGCTCTACTA
CTGGACTGGG AATCAATCAA TAGCACATTT TGTATCTGTA TAGTAATATC AGGGTCCTGG
ATATCCCATG CATACATTAT ATCCTAA
|
|---|
| Protein sequence | MSRPSSTSTH VAVVPTVPQV LHILANPPPT LIDAQLPGYL LPPTFNLLRE SSAHVVRKKK
REEDELRNEG LLPPLNEKDV KDESRLIEEE LSKRIVRIGL MVGGFIAEKL TLARPPISAH
LDIIKFICKD LFLYVYSKQI DNLRTNHRGV YVLQSNAFPP LVPLSSYKGS AADMDAANTH
LIFPQALIQG ALHRLGMNAV VSAESSSLPQ CTFQIRTLKP SNIPSTPMSG TPNPQPTTQR
QAPVSVSAGG YGQAAPGSPA MNVTGSSTTG LGINQ
|
|---|
| |