| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE03370 |
|---|
| Symbol | |
|---|
| ID | 3257756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 958756 |
|---|
| End bp | 962509 |
|---|
| Gene Length | 3754 bp |
|---|
| Protein Length | 907 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638256920 |
|---|
| Product | protein carrier, putative |
|---|
| Protein accession | XP_570902 |
|---|
| Protein GI | 58267492 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG5215] Karyopherin (importin) beta |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0220486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATACCTCATC CCCATGTCCA CAGAGCACCT CCTAGGAGAC ATAGGCGCGG TCCTCACAGC
GTTTATCGCC TCCGAGGACC ACCCAAGACG AGAGTATGTT CAAGTCTATC AGCATAACGA
TCACTGGCCA CTCGCTCACC GTTGACCTTT ACTAGGGCTG AGGCGCACCT CCAAAGGCTG
GCAGTCGAGC AGCCCGCTGA AGTCCTTCTC GTACTCGCTC AGGTGGGGGC ACAGGGTGTA
GGAGGTTTTC AGCTCGATGT AAGTCTTGTC AAAAACCGGC TATAGTATTA CCGTACTGTT
GTTGACTCTC ACTTTACATG TAGCACCGTC TTCTCGCCCT AATTCTTCTC AAGCGTATGG
CATTCAAACC ATTGGAAGGA CTTTTTCTCA ATCCTCAAAG TCAGAAACCA GCAGCTCCAT
TTGATGTAGT CCGTGAAACC ATTCGTGGGC GGATAGAGAC CGTCATATGT GCTGGCATCA
AAGATGAAAT GGACGTCAGA ATGAGAAAAG GCCTAGGAGC ATGTGCTGCC AACTGGGCGC
ATGAATGCGC AATCAGACAC CGTATGTTCC GAGCACAGCA GAGTGTATGT TCCTCTAATC
TGTGATTCAA AGGCCCATTG TTACCTCTTC CACCGGTCCT CCTTGAACTT ACAGCATCTC
CTCACCCCTT TCACCGCTTC ACTCCATTCC AGCTTCTAGA CCTGACGCCC ACACTACTAG
TTGACTCTGT CAGGGACCCT ATCCCTGCTG AGCAATTAGC GCAGATGTTA CAGGCCGGGC
TGAACGACCC TAGCGTAGAT GTGAGAGTTG AAGCCATGAA AGCTGTCAGG AGTGTCCTGA
TGGAGGGTGT GACGGGCTCG GAGAGGAGCG AGATTGGGGC GAACCTGGTT CTCCATTCTT
TCGAAGTGAG TGCTCAGCCT AAAAAGTTCC TCAATCTTTC TGATCGAGAA CACTAGACTC
TCCGTAATCT ACCACCCGCA CTGGTATCTC ATGCGTTGAT TCCACTGGTC GACCTTGCAT
CCGCCCACCC CAGTCTATTC ATGACATCTC TCAATCCCAT TTTATCATCC CTCCTGCCAC
TCCTTGCTCC TCCTGCGCAA GAAACTAATT TACCACCTTT CCAATTTTCT CCATATCCTC
CACACAACAT GACTTTTGAT GAGTGGGAAG ATATTTCCAA TCCTGCTACA GAAATCATCT
TATCGTTGAC GGAATTGCGA CCGTCACATA TATCTGAATG GGAAAATGGG AGAGCAGTAA
AGGAGATGAT TGGTTTATTG CTGGCAAGGC AGGTGGTGAC ATTCGGAAAC GATTCCCAAG
AATGGTTAGA GACCAAAGAT GTGGGTTTGA CGACCTGTGC GACTGACTTT TGCTAACGAA
AAGTAGCTGG ATGCGGAGGC AGACGAGTAT CCTGTACTTG CAGAAGAGAG TCTTAGTCGT
TTATCAATGG CTCTTGGTTA GTTCATTCTT CCCTTTTCCA CGTTGGGGTA CAACCTTAAT
TTCCAAATAG GGGGTGAACT CGTCTTGCCC ACACTATCAC AACAAGTCCA GGCGCTTCTC
CAACAAGAAG ACTGGCGTTG TCGATTTGCT GCCATCTCTG GTATCTCTAG CATAGCCGAA
GGCTGTCTCG ATGAGCTGCA AGCTGGTTTG CGTGAAGTTC TTGCGTGAGT GCCGTTGATC
ATTGTGACTG TATTACTGCT GACATTTTTG CAGTATGCTT TCTTCAGCAG CAAAAGATCC
TCATCCACGG GTGCGATACG AATTCCTGCA ATGTCTTGGC CAACTGTCTG CCGATCTTGA
GGTGAGCCTG CGATGTAGTT TCATTTACGA TTCCGACGAC TCACACCGTT CTTCCAAAGG
GAGCTCTGCA AGAGAATTTC GCCGATGATG TCCTGCAAAT CTCTTTGGCC TTACTTGACG
ACCCTGTTAT GAGAGTCCGT TCGCATTCAG CGGCATCACT TACAAACTTT TTTCAAGAAG
CAAGTCCTCG TCATTTTGAA AAATACCTCG AGCCCGTCGT TTGTGGACTC TTGAATCTCT
ATCAAAGTCA AGTCTTGTAC GCGCAAGATC AGGCCCTTGC TACTTTGGGT GAATAACCAC
GTCTGCTCAT AATGCGGACG ATAAACTGAT GATAATGCGT AGCTACGGTG GCTGCTGCGG
CCGAAAAGAT GTTTACGCCC TTCTACCGTG CGTGACATGA CTCAAAAATC CATTGATGTC
TACATTGAGA TGTCTGTGTT GATTGATAAT ACTCTGATAG GTAATATCAT GGACCTCTGT
TTCATGATAC TTTCAAATCC TGTAATTACC GATGTAGCGC AACGCAAGCT TCAAGGAAGA
GCTATGGAGT GCGGTACCTT GCTTGGTAGG TGTTATTCCC TTTGTCACAT GTATTTTCGG
CTGATGCGAA TGGTGCAGGT ATGGCGGTGG GCAAGAATGT GAGTCCAGTG CATGACCTGA
TATGGTATCC AGCGTTGACT CTTAAACCCT TCAGACATTT GGCACCGACG CCGTCAAACT
GTCACAGTTG ATGATCACCA TTCAAAATCA AATAGTCGAC GCAGATGATC CTCGCTCAGG
CTACCTAATG GATGGTAAGG ACATGCTTAT TTTATGGCCT TTTTATTTTC CCTTCTTTCT
GAGACCTTGG TTATTTTTAG CATGGTCAAA TGTCTGCCAA TCACTGGGTG CAGCGTTCGA
ACCTTTTCTG CAATACGTGG TGCCGAACCT GCTCAAGACG GCGTCTTATA AGCCTTCTGA
CTGTAAGTAA ACATGGAATC GCGTAGATGG TCTGTTGACG CATCGGTACC AGCTTCAAAC
GAGACGGGGG AAGATGATAC CGGCGGTGCG CACACATATG AAATTGATCA GAAGATCATG
GCATTTGAGA GCTTGACGAC GTATGCTTTC CAGATGCGGG GGAAATTTGC ACCTTGGTTG
GCACCGTGCA TGCAGCTGAG CTTGAACGAG CTGAGCTGTT CATTCTCCGA GGACGTGAGA
GAAGCCGCTG CATTGTGAGC AGGAGCGAGA AAAAATAATA ATCAATCTTT GATCATCGTG
CTAACCAAGA CTTTAGCTTG GTACCGGGAC TTCTCCAAGT CGCAAAAGAC TCCAAAGTGT
GGGCGGACGC GCCGTACAAT CTTACCCAAG TCTTTCAACA GCTTGTCAAT GTAATTGTCA
AGACTGACGA TATCGGTTAT ACCGCTCTAC TGTCAGTATT CCCCCCCCCT CGCCCGTCCC
CCGCCTGCGC ACAAGCCGTC AGACCACTTT TTTTGTTCTA ACAGCACAGC AGGTATAAAT
CATTCACCGA TTCCCTCCAT GTGATTTCCG CCCCGTTCCC TGCCGAGCTC ACGACGCAAC
TTTTAAAATC GGGACATGCC GTGTTGCACA CCATTGCCCA GACACGGGCG GACCGCGAGG
CTCAAGAGCC ATACATGGAC GAGTCGGATA AAGAGATTTA TCTTGAAGAG CAAAATGAGG
AAGAGGCGTG TTTGACACAG TTGAGAAAAG CGCTGGAGAT GGTTATCAAG GTGGGGGATT
CGAATGCGGG TACGGAACAG GGAGCGTTGG CGAATGGTTT GAGGGAAGAG TTGCAAGGTG
CGCTAGAGAT GGTGAGAGAG GTCAAGAAGA GGGGTATGAA GGGTGATGGA GAAAAGAGGT
TTGGTTGAAA TAGCTAATAT ATCACGTCTT GACGAGAACG AATTAGTTTT TATAATTAAA
TACCAGTTTT ATATCAACTG TAGTCTGGGG AATT
|
|---|
| Protein sequence | MSTEHLLGDI GAVLTAFIAS EDHPRREAEA HLQRLAVEQP AEVLLVLAQV GAQGVGGFQL
DHRLLALILL KRMAFKPLEG LFLNPQSQKP AAPFDVVRET IRGRIETVIC AGIKDEMDVR
MRKGLGACAA NWAHECAIRH RPLLPLPPVL LELTASPHPF HRFTPFQLLD LTPTLLVDSV
RDPIPAEQLA QMLQAGLNDP SVDVRVEAMK AVRSVLMEGV TGSERSEIGA NLVLHSFETL
RNLPPALVSH ALIPLVDLAS AHPSLFMTSL NPILSSLLPL LAPPAQETNL PPFQFSPYPP
HNMTFDEWED ISNPATEIIL SLTELRPSHI SEWENGRAVK EMIGLLLARQ VVTFGNDSQE
WLETKDLDAE ADEYPVLAEE SLSRLSMALG GELVLPTLSQ QVQALLQQED WRCRFAAISG
ISSIAEGCLD ELQAGLREVL AMLSSAAKDP HPRVRYEFLQ CLGQLSADLE GALQENFADD
VLQISLALLD DPVMRVRSHS AASLTNFFQE ASPRHFEKYL EPVVCGLLNL YQSQVLYAQD
QALATLATVA AAAEKMFTPF YRNIMDLCFM ILSNPVITDV AQRKLQGRAM ECGTLLGMAV
GKNTFGTDAV KLSQLMITIQ NQIVDADDPR SGYLMDAWSN VCQSLGAAFE PFLQYVVPNL
LKTASYKPSD SSNETGEDDT GGAHTYEIDQ KIMAFESLTT YAFQMRGKFA PWLAPCMQLS
LNELSCSFSE DVREAAAFLV PGLLQVAKDS KVWADAPYNL TQVFQQLVNV IVKTDDIGYT
ALLYKSFTDS LHVISAPFPA ELTTQLLKSG HAVLHTIAQT RADREAQEPY MDESDKEIYL
EEQNEEEACL TQLRKALEMV IKVGDSNAGT EQGALANGLR EELQGALEMV REVKKRGMKG
DGEKRFG
|
|---|
| |