Gene CNE02630 details

Gene Information

• Locus tag: CNE02630
• ID: 3257568
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 705733
• End bp: 707896
• Gene Length: 2164 bp
• Protein Length: 577 aa
• GC content: 46%
• IMG OID: 638256853
• Product: glucan 1,4-alpha-glucosidase, putative
• Protein accession: XP_570967
• Protein GI: 58267622
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG3387] Glucoamylase and related glycosyl hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGCTTCTTTG GCCGCTTCCA TTCATTCCTT GCGTAAGGGA TATCCGACTA TTGCCACCAT 
TCACCAGTTA CCAAATCATA ATATCATTGT GCACCCACTA GAGACCCTAT TACTACGTGA 
GAGGTTAATC GGTGCAATAT GGCATCAAGA ACAGAGATGG AATCCGACGA TCTTCTCTCA 
TTCGAAAAGA GCCTGTTCCT ACCCAGAAAT GCGACGCCGC GCCCATACAT TTCTAGAACT 
GAACACAACT GTCACAGGTA TAGGAGTGTG GTCATCAAGG GGCTATTTCT CTGCCTTCTC 
ATATTATCTG CGATAGTTAT CAGCGTCTCT CTAGGACTTT GGCCCCATTA TTTGAATTCG 
CGGTCGGTAC GCTTTGACCA CTGGAGTGGT CACCAAAATG TTTTTTTGGA GTCTAGAATT 
TTGGCGAATA TAGGACCAGG GATAGGCGCA AAGGAAGGGC TTGTAGTGGC CAGTCCTAGT 
AAGGGACATG GAAAAGAGCC AGACTACTAC GTAAGGTATT TTTCACGCTA ATCACCTGGT 
GCATACCAAT ACTGAGGGGT TCTTTCTTGA TAGTATACCT GGACCCATGA TTCTGCTCTA 
ACCATTTCTA CATTGATACC TCATTTGAGA TTTGATTTAG CCGATATCAA TAATACCACC 
GAACCGTGGG AGTTATACAG CGCCCTGTCT GACGTACTAA AGGAATATCT CTTTCGGGAC 
TATATTGAAA GTCAAGCAGA GATACAAATA GGCAAAAACC CTTCTGGTGA CTTGAAAAAA 
GGTGGCCTTA ATGAACCAAA ATTCCATGTC GACGGTACCC CCTTCACGGG GAATTGGGGA 
AGGCCTCAGA GGTAAGATTA TGAGTTTCAC ACATGATATT TTATGTATAA GGTACCCTGG 
CCGACTCATA GCTTGTCCAT ACAGAGACGG TCCAGCACTT CGGGCCATTG CGGTGATGAT 
TTATGCCAAC TTCCTCCTTG ACCGTGGATT TCCTTCAGAC GTCAGCTACG TGCAGCAACG 
GATCTATGAT CCCAGGCATC TCAAATCACC AGGGAGAGTC CTTAAGAACG ATTTGGAAGA 
GGTAGCACAC GGATGGTCAA AAGGCGGCTT TGATCTATGG GAAGAGGTGT AAGTGCAGGC 
AGCCAAAGAG AATGGTATAA TTCTGTTGAC ATAGATTGGA TAGTGATGGA CATCACCTAT 
TCACCCTTCT TGTTTCCCGT AAAGCCCTGT ACGATGGTTC GACATTTGCG AAACGTCTCA 
ACGATGTTGG AGCAGCGGAT CATTACCTCG CCCAAGCTCA TTCTATCACG CAGAAGCTTT 
CATCGTTTTG GGATTCCAAA AGAGGCTATT GGCTCTCAAG CTTGAGTGGT CGCGATTTTG 
AGCTTGTGCA GCTCAAGTCG GAATTTAACT TCACCAACGC ATATCCAAGA CGAGAATGGC 
TAGATTGTTC GATACCCCTG TCTATCATCC ATGCTGGCTC CCACACACTT CAACCCAGCC 
ATAATTTCTC TTTTCCGTTC TCTGCAACTG ATCCCAGTGT CCTTTCGACC ATACACCTTT 
ATATCAAGTC TTTTGATGGA CTTTACAGTA TCAATGATGG CAAGCCTTGG TCAGATGGAT 
GGGCGTTAGG GCGTTACAAG GAAGACGTAT ATGACGGTAA GGGCCAAAGT CAAGGGAATC 
CTTGGTTCAT TTGCACTTTT TCTGTTGCGC ATAGTCTGTA CCTCGCCTAC AAGGAGTTTC 
GTGAGGCAGG TGCCATTGTG ATTGCCAACC AAACCGTTGC GTTTTGGGAA GATGTCGTTT 
CGATCTCATC TAAACCTCCT AAAGTTAGGG AGGGCGATGT TTGGACTGAA GGGGAAGACT 
GGCAATTTAA GGAGGGAATG AAATGTTTGA AAGACGTTGC AGGCAGGTTC ATGGAAGTTG 
GCCAGCAAGT GGCGGCAGCG AACGGGGGAA GAATGAGCGA ACAAATAGAC AGGTAAGTGA 
AAACTCCACA GGAACGGGCA GACAATGACA AGGTCTTGGT CAATACAGAG ACGATGGGCA 
ATGTAGAGGG GCAAGGGATT TGACCTGGTC ATACGCAAGC TTGTTGGATT TGATCAGAGT 
GAGATCGGAT TTGGATTGAT TTCTATTCAT CAGCGACTCG TTGTATTATA CTTGATTTTA 
CCTA 

 

Protein sequence

MASRTEMESD DLLSFEKSLF LPRNATPRPY ISRTEHNCHR YRSVVIKGLF LCLLILSAIV 
ISVSLGLWPH YLNSRSVRFD HWSGHQNVFL ESRILANIGP GIGAKEGLVV ASPSKGHGKE 
PDYYYTWTHD SALTISTLIP HLRFDLADIN NTTEPWELYS ALSDVLKEYL FRDYIESQAE 
IQIGKNPSGD LKKGGLNEPK FHVDGTPFTG NWGRPQRDGP ALRAIAVMIY ANFLLDRGFP 
SDVSYVQQRI YDPRHLKSPG RVLKNDLEEV AHGWSKGGFD LWEEVDGHHL FTLLVSRKAL 
YDGSTFAKRL NDVGAADHYL AQAHSITQKL SSFWDSKRGY WLSSLSGRDF ELVQLKSEFN 
FTNAYPRREW LDCSIPLSII HAGSHTLQPS HNFSFPFSAT DPSVLSTIHL YIKSFDGLYS 
INDGKPWSDG WALGRYKEDV YDGKGQSQGN PWFICTFSVA HSLYLAYKEF REAGAIVIAN 
QTVAFWEDVV SISSKPPKVR EGDVWTEGED WQFKEGMKCL KDVAGRFMEV GQQVAAANGG 
RMSEQIDRDD GQCRGARDLT WSYASLLDLI RVRSDLD