Gene CNE02030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE02030 
Symbol 
ID3257534 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp547121 
End bp550007 
Gene Length2887 bp 
Protein Length665 aa 
Translation table 
GC content48% 
IMG OID638256795 
Productconserved hypothetical protein 
Protein accessionXP_571133 
Protein GI58267954 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0945136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GGTTCTCCCT GGCATTTCTC CATACATCTG ACACCGCAAT GCTTGCAAGG TCAGAATCCG 
CTCACAGTAC GTTAGATTTT GGATCAGAAA CGACACATTC TCCTCTCCCA TCCGCCGAAC
AAGAATCTAG ATGGTATAGA AGGGATCCCG GCAACTCAAA GCAGCGCTGG ACCTCGCATC
CTTATGCAAT ACACTCTGTA ATACACGTAC GTTGGTTCAT TCAAATATGG CCAAGTGAGA
CGCTCATTCT ATATGCAGCA AGGCGATTCA CTTACCAATG ACCTGGACCG GTACGACGAT
GCCAAGTTTT GGCCGTTCGT AGGAGCTCTA AAGCCATGGA AAAGGCCTGA CGGCTTAGAC
CAGTGGAAAT GGGACGATTT TGAGGACACC GTGGCGTTCT GTGGGCTCAA CAAGGCAAGA
CAAATTGGAC ATTCACCTGT TCCATTCCTC ATTGACTGTC TATTAGTTAA TGATAGGCAA
ATGCGCGGAC AATCAACCCT GGAGAGTAAT GTTGGACATG AGTTTTGAAG ATGTAATCAT
ATTTTGATGA CTCATGGCGC GAACTAGCTA ACCATTGACA GGATACTCTC TACACACTCG
CTTGGACCTA TCACCCCTTC ACCTGCCATC CTCTTATTGC CGTTGCAGGT GCGAATGCCT
TGATCTACAT CATCGACATA ATCACAAAGC GATGTATCAG GACTCTGAAA GGCCATGGAG
ATGTGAGTTT CGCCAACGCA GCTCCTAGCT TTTGGTCTGA TGTGAGATGA TATTATCAGG
AAATCCTTTG TCTCGCTTTC GCTCCTCTGA ACCCACATAT TCTGGCCTCG ACATCAAGTG
ATCGATCGAT AAGGATATGG AATATTCTGG GATCGGATGC GCCATCGCCC CATCCTGGTG
ATCTTCCTTC TGAAAATTAT CCAATGGCAG ATGCCGATGA AGGTAATGTC ATTGTCGCTG
TATTAGCAGG TGAAGGAAAA GGAGGACATC GTGCCTACGT CGTCTCATGT GTGAATACAA
TCTCTGCATC CATAGACGAC AAGTTCTAAT GCTTTCACAG GCTTTTCACC CCACAAAAAG
GGCCATCGCT ACCTGCGGCA TGGATTATAC AGCCAAAATC TGGCCTTTGC CACCTTTTCC
TGACCCGTCA CCAGTTCCAA TCCCGACCCC TCTTGGCTAT CGACCGATAA TTATGTACTT
TCCTCTCTTT TCCACAAGTC GTCTTCATTA TGGTTTCCTG GACTGGATCG AATGGTGAGT
TGTGGATCCG GTCAAATTTG ACTGTTACTA AGCATTTTAT CAAGGATTAC GGATGACATT
CTTATCATAC GTGGTGATAA GGTGATGGTG ACATGGCAAT GGCTGAGCTA TTCCCGTTAC
TTCAGAGAAG ACGAGTACGC ACCTCTTAGC ATGGAGCCGG CTTCTTACAG TGATTATACT
GATTCTGGTA TGTTTGCCTT TTTTTGTTTT TGTTTTTTTC AACACCTACT TTACACTCAC
ATTCCCTATA GGGTCATTTA TGGTCGTTAG CCGGGTTAAC ACATTGACCG ATATGTGGTT
CCGTCATCCG CATCTCCATC GTGGTTTCCA TCCTACCTCG GCAGATTTGG CTCGCTTTCC
GAACAGTAAT AATATAGTCA CTGACCCACT CCTCGCTTGC CCGCATCAGA TGGACCCTAG
GGAGATGAGA AAACACTGGT ATCCCGAGGT TCGTTTGTAT AACTTCTTGA TGGCAAGAGA
CGGAAGACCC CCTCGGCCGA TAACAGAGTT ACGTCCCTAC AAGCCCGAGA TCTATAACAT
ATCTGTAGAC TTTGAGAAAG AAAACACCGA AGGATCAAAA ATGCGCAAGA AATCTTCGAC
CCAACAGGTG GTCAAGCGCA AATACATCAC TTTTCCTGAC GAGGGAAGCG AGACGAGGTC
AGCGGCCGGC TCGGCTCATA ATTCTTTGCT GGTTCCTTGG AGGCTGAGAC CTACCACTTC
TCCCTGGCCA ACGAAGCGGG AGCCTTGGCT GAGATCCCAA TACCGCACAG GGATCTGCAA
TGTGGCAATA AGTCCCAGGG GAGCCAGATG GATTGTGGGT GTGGGGGAGG GTATGTCCAT
ATTTATATGG AGGATGAAAG ATTAGGATAC TTTAGGTGCT ATTTCACAGT ACGTTTTCTT
GTCCATCAAG CTGTCGATTA AATTAATACA TGGACTACAT AAAGTTGTCA TTCGTCAAGG
ATTGAGATTT TTTTTTTAAA TCAAAGAGTA TGTTATCGTT TCGTCAACTC ATTTCTCATT
CGCATTATGG GACTCCATTA CGCCATCAGC CATTTCTTCT TCACGCCCAT TGCATCTTCG
ACATCTTTTC CATGCGTCAT GCTCTGTGCC GTCCCTTCCC CGGTAATGCC AGCTATCACA
TGGATCGGCG TTCCAGGCTG GCTGTTTGCG GAGCTCACAC TGGGACTCGG GCTCGTAGGG
CCCTTGACAA AAGGAGTTGG CGGTCGACGT TTATTAGGGG ATGTTTGGGG AGGAAGAACG
TCATCTATTG CAGAGAGCGA GAAGCTCACA GACTTGCGTT TGTGTCCAAA TCGCTTCGTG
AGGCTACCAA TTGATGACCG TCTAGAGCGC GAGTAGGTTT CCGGTGCATC TGGAGTTAAG
ATAATGCTGG GAACCACAAA AGGCATACCA ACTCCAGGTA CACTCAAATG GGAGCTTGAG
GCGCTAGCTG GTGTGATAGG CGAAAGGGGG CTAGCTGGCG GAGAAATCAA AAGATCGCCA
GGTGGGGTGA TATTGAGCTG AGGCGTCCGA GAGATGGAAG GGATTAGGAG TAGGGTGAGA
ACAAGGAACA AGGTGTCGAT AGAGACTGAC CAAGGGTCCA TGGTGATGTA TGTCAGCTTC
GAGATAG
 
Protein sequence
MLARSESAHS TLDFGSETTH SPLPSAEQES RWYRRDPGNS KQRWTSHPYA IHSVIHQGDS 
LTNDLDRYDD AKFWPFVGAL KPWKRPDGLD QWKWDDFEDT VAFCGLNKLM IGKCADNQPW
RVMLDMSFED DTLYTLAWTY HPFTCHPLIA VAGANALIYI IDIITKRCIR TLKGHGDEIL
CLAFAPLNPH ILASTSSDRS IRIWNILGSD APSPHPGDLP SENYPMADAD EGNVIVAVLA
GEGKGGHRAY VVSCAFHPTK RAIATCGMDY TAKIWPLPPF PDPSPVPIPT PLGYRPIIMY
FPLFSTSRLH YGFLDWIEWI TDDILIIRGD KVMVTWQWLS YSRYFREDEY APLSMEPASY
SDYTDSGSFM VVSRVNTLTD MWFRHPHLHR GFHPTSADLA RFPNSNNIVT DPLLACPHQM
DPREMRKHWY PEVRLYNFLM ARDGRPPRPI TELRPYKPEI YNISVDFEKE NTEGSKMRKK
SSTQQVVKRK YITFPDEGSE TRSAAGSAHN SLLVPWRLRP TTSPWPTKRE PWLRSQYRTG
ICNVAISPRG ARWIVGVGEG AISHHFFFTP IASSTSFPCV MLCAVPSPVM PAITWIGVPG
WLFAELTLGL GLVGPLTKGV GGRRLLGDVW GGRTSSIAES EKLTDLRLCP NRFVRLPIDD
RLERE