Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE02030 |
Symbol | |
ID | 3257534 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 547121 |
End bp | 550007 |
Gene Length | 2887 bp |
Protein Length | 665 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256795 |
Product | conserved hypothetical protein |
Protein accession | XP_571133 |
Protein GI | 58267954 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0945136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GGTTCTCCCT GGCATTTCTC CATACATCTG ACACCGCAAT GCTTGCAAGG TCAGAATCCG CTCACAGTAC GTTAGATTTT GGATCAGAAA CGACACATTC TCCTCTCCCA TCCGCCGAAC AAGAATCTAG ATGGTATAGA AGGGATCCCG GCAACTCAAA GCAGCGCTGG ACCTCGCATC CTTATGCAAT ACACTCTGTA ATACACGTAC GTTGGTTCAT TCAAATATGG CCAAGTGAGA CGCTCATTCT ATATGCAGCA AGGCGATTCA CTTACCAATG ACCTGGACCG GTACGACGAT GCCAAGTTTT GGCCGTTCGT AGGAGCTCTA AAGCCATGGA AAAGGCCTGA CGGCTTAGAC CAGTGGAAAT GGGACGATTT TGAGGACACC GTGGCGTTCT GTGGGCTCAA CAAGGCAAGA CAAATTGGAC ATTCACCTGT TCCATTCCTC ATTGACTGTC TATTAGTTAA TGATAGGCAA ATGCGCGGAC AATCAACCCT GGAGAGTAAT GTTGGACATG AGTTTTGAAG ATGTAATCAT ATTTTGATGA CTCATGGCGC GAACTAGCTA ACCATTGACA GGATACTCTC TACACACTCG CTTGGACCTA TCACCCCTTC ACCTGCCATC CTCTTATTGC CGTTGCAGGT GCGAATGCCT TGATCTACAT CATCGACATA ATCACAAAGC GATGTATCAG GACTCTGAAA GGCCATGGAG ATGTGAGTTT CGCCAACGCA GCTCCTAGCT TTTGGTCTGA TGTGAGATGA TATTATCAGG AAATCCTTTG TCTCGCTTTC GCTCCTCTGA ACCCACATAT TCTGGCCTCG ACATCAAGTG ATCGATCGAT AAGGATATGG AATATTCTGG GATCGGATGC GCCATCGCCC CATCCTGGTG ATCTTCCTTC TGAAAATTAT CCAATGGCAG ATGCCGATGA AGGTAATGTC ATTGTCGCTG TATTAGCAGG TGAAGGAAAA GGAGGACATC GTGCCTACGT CGTCTCATGT GTGAATACAA TCTCTGCATC CATAGACGAC AAGTTCTAAT GCTTTCACAG GCTTTTCACC CCACAAAAAG GGCCATCGCT ACCTGCGGCA TGGATTATAC AGCCAAAATC TGGCCTTTGC CACCTTTTCC TGACCCGTCA CCAGTTCCAA TCCCGACCCC TCTTGGCTAT CGACCGATAA TTATGTACTT TCCTCTCTTT TCCACAAGTC GTCTTCATTA TGGTTTCCTG GACTGGATCG AATGGTGAGT TGTGGATCCG GTCAAATTTG ACTGTTACTA AGCATTTTAT CAAGGATTAC GGATGACATT CTTATCATAC GTGGTGATAA GGTGATGGTG ACATGGCAAT GGCTGAGCTA TTCCCGTTAC TTCAGAGAAG ACGAGTACGC ACCTCTTAGC ATGGAGCCGG CTTCTTACAG TGATTATACT GATTCTGGTA TGTTTGCCTT TTTTTGTTTT TGTTTTTTTC AACACCTACT TTACACTCAC ATTCCCTATA GGGTCATTTA TGGTCGTTAG CCGGGTTAAC ACATTGACCG ATATGTGGTT CCGTCATCCG CATCTCCATC GTGGTTTCCA TCCTACCTCG GCAGATTTGG CTCGCTTTCC GAACAGTAAT AATATAGTCA CTGACCCACT CCTCGCTTGC CCGCATCAGA TGGACCCTAG GGAGATGAGA AAACACTGGT ATCCCGAGGT TCGTTTGTAT AACTTCTTGA TGGCAAGAGA CGGAAGACCC CCTCGGCCGA TAACAGAGTT ACGTCCCTAC AAGCCCGAGA TCTATAACAT ATCTGTAGAC TTTGAGAAAG AAAACACCGA AGGATCAAAA ATGCGCAAGA AATCTTCGAC CCAACAGGTG GTCAAGCGCA AATACATCAC TTTTCCTGAC GAGGGAAGCG AGACGAGGTC AGCGGCCGGC TCGGCTCATA ATTCTTTGCT GGTTCCTTGG AGGCTGAGAC CTACCACTTC TCCCTGGCCA ACGAAGCGGG AGCCTTGGCT GAGATCCCAA TACCGCACAG GGATCTGCAA TGTGGCAATA AGTCCCAGGG GAGCCAGATG GATTGTGGGT GTGGGGGAGG GTATGTCCAT ATTTATATGG AGGATGAAAG ATTAGGATAC TTTAGGTGCT ATTTCACAGT ACGTTTTCTT GTCCATCAAG CTGTCGATTA AATTAATACA TGGACTACAT AAAGTTGTCA TTCGTCAAGG ATTGAGATTT TTTTTTTAAA TCAAAGAGTA TGTTATCGTT TCGTCAACTC ATTTCTCATT CGCATTATGG GACTCCATTA CGCCATCAGC CATTTCTTCT TCACGCCCAT TGCATCTTCG ACATCTTTTC CATGCGTCAT GCTCTGTGCC GTCCCTTCCC CGGTAATGCC AGCTATCACA TGGATCGGCG TTCCAGGCTG GCTGTTTGCG GAGCTCACAC TGGGACTCGG GCTCGTAGGG CCCTTGACAA AAGGAGTTGG CGGTCGACGT TTATTAGGGG ATGTTTGGGG AGGAAGAACG TCATCTATTG CAGAGAGCGA GAAGCTCACA GACTTGCGTT TGTGTCCAAA TCGCTTCGTG AGGCTACCAA TTGATGACCG TCTAGAGCGC GAGTAGGTTT CCGGTGCATC TGGAGTTAAG ATAATGCTGG GAACCACAAA AGGCATACCA ACTCCAGGTA CACTCAAATG GGAGCTTGAG GCGCTAGCTG GTGTGATAGG CGAAAGGGGG CTAGCTGGCG GAGAAATCAA AAGATCGCCA GGTGGGGTGA TATTGAGCTG AGGCGTCCGA GAGATGGAAG GGATTAGGAG TAGGGTGAGA ACAAGGAACA AGGTGTCGAT AGAGACTGAC CAAGGGTCCA TGGTGATGTA TGTCAGCTTC GAGATAG
|
Protein sequence | MLARSESAHS TLDFGSETTH SPLPSAEQES RWYRRDPGNS KQRWTSHPYA IHSVIHQGDS LTNDLDRYDD AKFWPFVGAL KPWKRPDGLD QWKWDDFEDT VAFCGLNKLM IGKCADNQPW RVMLDMSFED DTLYTLAWTY HPFTCHPLIA VAGANALIYI IDIITKRCIR TLKGHGDEIL CLAFAPLNPH ILASTSSDRS IRIWNILGSD APSPHPGDLP SENYPMADAD EGNVIVAVLA GEGKGGHRAY VVSCAFHPTK RAIATCGMDY TAKIWPLPPF PDPSPVPIPT PLGYRPIIMY FPLFSTSRLH YGFLDWIEWI TDDILIIRGD KVMVTWQWLS YSRYFREDEY APLSMEPASY SDYTDSGSFM VVSRVNTLTD MWFRHPHLHR GFHPTSADLA RFPNSNNIVT DPLLACPHQM DPREMRKHWY PEVRLYNFLM ARDGRPPRPI TELRPYKPEI YNISVDFEKE NTEGSKMRKK SSTQQVVKRK YITFPDEGSE TRSAAGSAHN SLLVPWRLRP TTSPWPTKRE PWLRSQYRTG ICNVAISPRG ARWIVGVGEG AISHHFFFTP IASSTSFPCV MLCAVPSPVM PAITWIGVPG WLFAELTLGL GLVGPLTKGV GGRRLLGDVW GGRTSSIAES EKLTDLRLCP NRFVRLPIDD RLERE
|
| |