Gene CNE01840 details

Gene Information

• Locus tag: CNE01840
• ID: 3258003
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006687
• Strand: +
• Start bp: 500657
• End bp: 502720
• Gene Length: 2064 bp
• Protein Length: 551 aa
• GC content: 49%
• IMG OID: 638256774
• Product: general amidase, putative
• Protein accession: XP_570813
• Protein GI: 58267314
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCTCG ACGTTATCCC CTCGTGGTCT GAAATTGCTG CTGCCAAAGT GGCTGCCAGA 
GACGCCCTTA TCCCTGAGAA ATGGCGCATC CCAGTTACCG ATGCGCTGAA TGTCATCGAT 
ATCCCCAAGA CATGCGGTGT TCTCTCTCCC GGAGAAATCG AAATCACAGA GACACCTGCT 
CCCAAGTTGG TCCAAAAAAT CCTTAGTGAA GAGTTGAGTA GTTACGACGT GACACTTGCT 
TTCTGCAAGC GTGCAGCTAT TGCCCAGCAG CTCGTGCGTC CTTTTCTTTC CCCCCCTCTA 
TCTGCCATTA GAGATGCAAA AGCAGGGACT GACCACAGTT CAGACCAACT GTCTCACTGA 
AATCTTCTTT GAAGAAGCGC TCAAAGCTGC TGCTGGCATC GATGCCGAAT ATTCCAAGAG 
CAAGACCCCT CTTGGTCCTC TTCACGGTCT TCCAGTTTCT CTCAAAGACA ACTTTTACAT 
CGAAGGCGTT GACACAACTG TTGGATTTGT CGCCTGGGCC AATGATCCTG CCAAGAAGCA 
ACAAGAGAGT GAAATGACCC AAGTCATGAG AGAATGCGGT GCTGTACTCT TCTGCAAGAC 
GTAAGTCCAT TACAGTGAAT GTATGGTATC GGTCTGACAG TTTTGGTGAA TAATGTAGCA 
ACGTACCCAC GGCCATGATG ATCGCCGAAT CTTACAATAA TGTATGGGGT TATACATGCA 
ACCCCTACAA CCGCACCTGC TCTTCTGGCG GGTCTTCTGG AGGAGAGTCA GCTTTGCTCG 
CGATGAAAGG TCAGTGCTTT GAATTGAAAG CTTACCTTCT ACTTTAGCTG ATCCGCACTC 
CATTATTGCA GGCTCCCCCC TTGGCGTTGG TACAGACATT GGTGGTTCTA TTCGAATTCC 
CGCATCTATG TGTGGTCTCT ATAGCTTGAA GCCTTCTTTC GGCCGCTTCC CGACTTACGG 
TGCGCGCTCC GGTCTGCCGG GCCAAGAAGC TATCCGTTCT ATTAATGGAC CCATGTCCAC 
TGCATTGGAA AGTGTGGGAA TGTGGGTCAA AGCAGTAGTA GACAATAAGC CTTGGGACAG 
GGATCCCAAC ATGATTCCTA TCCCTTGGAG GGACGTGGAG GTACCTGAAA AGCTTTGCTT 
TGGTGTGTGA CGGCGTTCGT TGTATTGATA CCAGGCTAAT GTATGATACA TCAGGCCTGA 
TCATGGATAA TGGGATCGTG AAGCCTACAC CGCCTGTTAC CCGGGCATTG CTTGAGACAA 
AGGCCGCTTT AGAAAAGGCC GGTCATAAGG TTATCGAGTG GTCACCGTAG GTCATCAGTT 
TATTATACTA TGGGTCTCAA AATTTACCAG CGCTCTAGAT ACAATGCCGA GGAGGCCACA 
GCTCTTGGTG CCCGGTTTTT CACCGGTGAC GGTGGAGTTA AGATTGCCCA GATTCTCGCC 
CTTTCGGGAG AGCCTTACCC CGAAGGTCTT GCAGGTTATC GCAAACGCTT TGACGCTATA 
AAAGAGAACC CTCCACTTGT TGGAGCCCTT TGGGAGATGC AGTCTGACAG AGTTTCCTAC 
TGCAAGAGGA ATTTGCAGCA CTGGTTGGCC AGCAAGGACG TGACTGGCAC CGGCCGTCCT 
TTCGACGGGC TTATAAGTCC TGTCTCAATG CATTCAGCTT GTCCCAAGTA AGTTTTCGTC 
ACTGCTGCAC GTCTAGTAGT AAACTCACAG TCGATATCGC AGGATGGCTT TTAATGATCA 
TGTTACATAC ACCTTGATGT GGAACATTAT GGACTACTCT GCCACCACCT TTCCAGTCAG 
TTTTGTCGAT TCACAACTTG ATAAGAAGCC TGCATATGAG CCGCGAAATG AAACCGAGAA 
GAAAATCTGG GATCGATGTG AGTTTCGTGC TTGTGTCAAA TTGAGTGATT GCTGACCAAC 
CTGTTGATGA ACTTAGATGA TTCAACTGAA GTTGTTGGCG CCCCTGTCTC GCTTCAGTTA 
GTATGTCAAA GACTCGAGGA AGAGAAAGCT CTCAAATTGA CAGAAGTCAT TGCCAAGGCT 
CTCGTTGAAG CTGGAGCAAA GTGA 

 

Protein sequence

MTLDVIPSWS EIAAAKVAAR DALIPEKWRI PVTDALNVID IPKTCGVLSP GEIEITETPA 
PKLVQKILSE ELSSYDVTLA FCKRAAIAQQ LTNCLTEIFF EEALKAAAGI DAEYSKSKTP 
LGPLHGLPVS LKDNFYIEGV DTTVGFVAWA NDPAKKQQES EMTQVMRECG AVLFCKTNVP 
TAMMIAESYN NVWGYTCNPY NRTCSSGGSS GGESALLAMK GSPLGVGTDI GGSIRIPASM 
CGLYSLKPSF GRFPTYGARS GLPGQEAIRS INGPMSTALE SVGMWVKAVV DNKPWDRDPN 
MIPIPWRDVE VPEKLCFGLI MDNGIVKPTP PVTRALLETK AALEKAGHKV IEWSPYNAEE 
ATALGARFFT GDGGVKIAQI LALSGEPYPE GLAGYRKRFD AIKENPPLVG ALWEMQSDRV 
SYCKRNLQHW LASKDVTGTG RPFDGLISPV SMHSACPKMA FNDHVTYTLM WNIMDYSATT 
FPVSFVDSQL DKKPAYEPRN ETEKKIWDRY DSTEVVGAPV SLQLVCQRLE EEKALKLTEV 
IAKALVEAGA K