Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE01460 |
Symbol | |
ID | 3257608 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 399244 |
End bp | 400897 |
Gene Length | 1654 bp |
Protein Length | 383 aa |
Translation table | |
GC content | 49% |
IMG OID | 638256734 |
Product | expressed protein |
Protein accession | XP_571122 |
Protein GI | 58267932 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5052] Protein involved in membrane traffic |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TGCGTCGACT GACTATCATT TCCCCTCCAT TGACGCTGCC CATAACTCTT ACAGGACTCT CATACACTTG CTGACCCATT TTTCGCTATG GTATTCGGCC TTCTCTGCAG GTGGGCATGG TAAGTGGCGG CACTCCATTT TCCGCTGTTA GCATGTCGCA AACAGTATCG ACCATCAACC GCCACGGCTA ACTCACTACC CACAGTAACA TTTGCTCTTA CCTATACCCA GCATATGCAT CCTACAAGGC ATTATCTATC CACCCAGAAA GCTCACCCGA AGCGATGGCT CAAGTGGAGA GATGGTTGAT GTACTGGGCA GTGGTTGGGA CTTGGACAGC TGTTGAAGCT ATAATCGGGT GGACTATTAC ATGGTAAGTG TGACGGCCTG AAAGTTTCTG ATGGTGCCAA CGTTTAACTA TCTAACCGGT TTTTAATGAT CCCAGGATGC CGTTCTACAG TCTTATTAAG ACTTTTGTGT TCCTTTCTTT GTCGTTGCCA CAATTTGAAG TAAGAAGGAC CGTATTACAA GTATATTCGG GAAATCCGCT GATTCGTTCC TTCATCTTTC TGGGCACAGG CCTCCACATA TATCTACCGT TCTCATCTCT CACCATTTTT TCAGGAGCAC GAGCAAGACA TCGATGCCTT CCTCGCTTCT TCACGCAGTC GCGCAGGCTT TGCTTTGGTG GAAAGCGTGG GTTGGATTTG GCAAAAGGCA AAGGTTCAGC TCAACGTAAA TCTCTTCTTC CTCATATTAT ATCTCTTAAG CTCATTCATT GGAACAGATT ACGTTGCCTG ATGAGCAGCT TCAAGCGGCT GCCATGTTGG CTCAAAACCA AGGTCAAGGC CGACCTAATG AAGGAGGTTA TCCTGCTCAG GATGTGCACC AACCTCCTAC TCTTTCTGAC CCTGCGTCCG GTGCTCTTCA GACGGCGTTG CATTTTGTTT CAAATTATGC TGGGAGGTGT GTATAATCTT AGATCGCATT GGATGTGGGA ATCATTTTCT AACCGAACAT CAGATACATG CCGGTTGCCC TCACAGCCCT TTCCGCTGCG GCAGCTTCAG CTAAAGGGCA AGCTGGCGAA TCTCAAGGAG GCGCCTCATC AAGTATCACA CCACAATCCC GTGCGACTCA GATGCCTCAG CAGATGACCA TGCCCGTCCC TGTCCCGACT CCTCCTGTCC ATCAGCAGCA ATCTGACCCC TCTTTGCGTT CCCGCGCTTT TATGCACGCA TCCAGCAATA ACAGTGCAGG CCAATATCCA AGCCTGAACA ACCTCAAGCA GCAACAACAG TATCAAGCGC TTAGCTCCGC TAGGTCTCCT CCCCAAGGCT TTTCGGGCAG ATCCGCATCA GGTCCTGCAG GTCCTGCACG GATGTCTCAA TCCTCGTCAC GCAGTTCAGA TGAGTCTCTC GGCTCCAGAT ATGAAGGATA TGAGCAAATT GGGAAGGACG AGCTACAAGA AATGAATAAC TCCAGGTCAC GGATGCAGGG AAAGAAGAAT TGGTTTGGAT GGGGTGGACC CGCTGGCATG AATGATGACA GGGATGACAG GGATAAGATC GACTAAGGCC TTCCTTAACG TGTATGCTTG CGAATGCTTT ACGCGCCTTG CTCAGTGTAT TTACAATAAC TCCTGTATCT CAAT
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Protein sequence | MVFGLLCRWA CNICSYLYPA YASYKALSIH PESSPEAMAQ VERWLMYWAV VGTWTAVEAI IGWTITWMPF YSLIKTFVFL SLSLPQFEAS TYIYRSHLSP FFQEHEQDID AFLASSRSRA GFALVESVGW IWQKAKVQLN ITLPDEQLQA AAMLAQNQGQ GRPNEGGYPA QDVHQPPTLS DPASGALQTA LHFVSNYAGR YMPVALTALS AAAASAKGQA GESQGGASSS ITPQSRATQM PQQMTMPVPV PTPPVHQQQS DPSLRSRAFM HASSNNSAGQ YPSLNNLKQQ QQYQALSSAR SPPQGFSGRS ASGPAGPARM SQSSSRSSDE SLGSRYEGYE QIGKDELQEM NNSRSRMQGK KNWFGWGGPA GMNDDRDDRD KID
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