Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE00860 |
Symbol | |
ID | 3257696 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 229044 |
End bp | 230503 |
Gene Length | 1460 bp |
Protein Length | 352 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256672 |
Product | conserved hypothetical protein |
Protein accession | XP_570816 |
Protein GI | 58267320 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0324614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGTCG CTACTACTCC CGACACAAAG CTCAAGCTCG CCGTCATCGG TTTAGGTCGA ATTGGTGCCG TTCGAGCCCG TATCCTCAGT AATTACGCTC CCAAGATCCA CGTGGTGGCC GCTTGCGACT CCAAACCCGG GTCTGACGTT TGGGCCGCTG AGAACTTGCC TTCCCATGTA CAGTTCTTCT CCGACCCAGA GGAGTTGTTC CAAAAGAGTG GTGCTCAAGC TGTCTTGATC TCTACTGTCA CTGCTACTCA TGCTCCCCTT GTTCTTCGTG CTCTGGAGTT AGGCTACGTG AGTCTGATAG TGAATGATTA GAAGGAAGAG CTGACAAAAG TCTTCAGCAC GTCATGTGTG AGAAGCCTAT CGCTGTTGAC ATTGCCACTA CGAAGCAGGT CGTCGAAGCT GCCAGAGCCA AGCCTGAGCT CAAATTTTTG GTTCCCTTCT GCCGTCGATG TAAGTTGGCC TGTTGAATGT TTTAATTCTT TTTGTTTGGT GACTAATAGC ATTCGCAGAT GATGAGTCTA ACCGAGCTCT CAAGATGTTA GTCGACGCAG GAGAGTTGGG AGACATCCAC GCCGTCGAAT CTTGGTGTCT TGACGCCCAG GACCCCACAG GTTAGTAACA GAGTATTGTA CCTCACCATA TACTCACATC CATTCAAAGG TTTCTTTGTC CAGTTCTCAG CCATGTCTGG CGGTATTTTT GTCGACATGG GCGTTCACGA CGTAAGCTTC TCTAGGCCAT CCGTTTACCT TAATTGCTGA TCGTCTTCGA AGATTGACAT TGCCCGCTAC TTCCTCAACG TTAAAAAGGG TCTGATTAAC CCTAAGAAGC AAGTCAACAG GGTCATCGCA TTTGGTCAGA CCGCTGTCTA TCATGATCTG CAGAAATTTG GGGATGCCGA TAATGGTTAC GGTATCGTCG AGTTTGCCAA TGGGAAGATC CTTACTTCCC ATATTGGACG AACTCTTACC AATGGGCACG AGAGTTCCAC CAGAGTCTTT GGTACCAAGG GTACAGCTGT AGTCAACGCT GTGAGAGGCA TTTATTCTGC GATAAAGAGC AAAATTGACG TTAATTATCT AGGAATCTCC TGCAAACCGT GTTCAGCTAC GAGACGCCCA TGGAGTGAGA AGTGAGACAA CGTATGTATC CATAAAATAC CCTCTCCAGA CATGGGCTCA TCATTTCTTC TAGTGGCGAC GCCTTTGTTC TTTACCAACA ATCCTTCGTC AATGATCTTG ATGAGTTTGC CACCTGTGTA TTGGAGGACA AACGTGAGTG TCCCCATAAA AAGAGTTTCC GGATATCCAA TTCATATAAT TACTCCAGCT TTATCCCTCC AACCTGAAGA CGCTCTTGAG GCCAGCAAGA TCGCCACTGC TCTGCAATAC TCTTTCCGAA ACAGGGTGGC TGTTGAGTTT GACGACGAAG GAGAGCCTAT CATGCCTTAA
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Protein sequence | MPVATTPDTK LKLAVIGLGR IGAVRARILS NYAPKIHVVA ACDSKPGSDV WAAENLPSHV QFFSDPEELF QKSGAQAVLI STVTATHAPL VLRALELGYH VMCEKPIAVD IATTKQVVEA ARAKPELKFL VPFCRRFDAG ELGDIHAVES WCLDAQDPTG FFVQFSAMSG GIFVDMGVHD IDIARYFLNV KKGLINPKKQ VNRVIAFGQT AVYHDLQKFG DADNGYGIVE FANGKILTSH IGRTLTNGHE SSTRVFGTKG TAVVNAESPA NRVQLRDAHG VRSETTGDAF VLYQQSFVND LDEFATCVLE DKPLSLQPED ALEASKIATA LQYSFRNRVA VEFDDEGEPI MP
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