Gene CNE00860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE00860 
Symbol 
ID3257696 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp229044 
End bp230503 
Gene Length1460 bp 
Protein Length352 aa 
Translation table 
GC content48% 
IMG OID638256672 
Productconserved hypothetical protein 
Protein accessionXP_570816 
Protein GI58267320 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0324614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTCG CTACTACTCC CGACACAAAG CTCAAGCTCG CCGTCATCGG TTTAGGTCGA 
ATTGGTGCCG TTCGAGCCCG TATCCTCAGT AATTACGCTC CCAAGATCCA CGTGGTGGCC
GCTTGCGACT CCAAACCCGG GTCTGACGTT TGGGCCGCTG AGAACTTGCC TTCCCATGTA
CAGTTCTTCT CCGACCCAGA GGAGTTGTTC CAAAAGAGTG GTGCTCAAGC TGTCTTGATC
TCTACTGTCA CTGCTACTCA TGCTCCCCTT GTTCTTCGTG CTCTGGAGTT AGGCTACGTG
AGTCTGATAG TGAATGATTA GAAGGAAGAG CTGACAAAAG TCTTCAGCAC GTCATGTGTG
AGAAGCCTAT CGCTGTTGAC ATTGCCACTA CGAAGCAGGT CGTCGAAGCT GCCAGAGCCA
AGCCTGAGCT CAAATTTTTG GTTCCCTTCT GCCGTCGATG TAAGTTGGCC TGTTGAATGT
TTTAATTCTT TTTGTTTGGT GACTAATAGC ATTCGCAGAT GATGAGTCTA ACCGAGCTCT
CAAGATGTTA GTCGACGCAG GAGAGTTGGG AGACATCCAC GCCGTCGAAT CTTGGTGTCT
TGACGCCCAG GACCCCACAG GTTAGTAACA GAGTATTGTA CCTCACCATA TACTCACATC
CATTCAAAGG TTTCTTTGTC CAGTTCTCAG CCATGTCTGG CGGTATTTTT GTCGACATGG
GCGTTCACGA CGTAAGCTTC TCTAGGCCAT CCGTTTACCT TAATTGCTGA TCGTCTTCGA
AGATTGACAT TGCCCGCTAC TTCCTCAACG TTAAAAAGGG TCTGATTAAC CCTAAGAAGC
AAGTCAACAG GGTCATCGCA TTTGGTCAGA CCGCTGTCTA TCATGATCTG CAGAAATTTG
GGGATGCCGA TAATGGTTAC GGTATCGTCG AGTTTGCCAA TGGGAAGATC CTTACTTCCC
ATATTGGACG AACTCTTACC AATGGGCACG AGAGTTCCAC CAGAGTCTTT GGTACCAAGG
GTACAGCTGT AGTCAACGCT GTGAGAGGCA TTTATTCTGC GATAAAGAGC AAAATTGACG
TTAATTATCT AGGAATCTCC TGCAAACCGT GTTCAGCTAC GAGACGCCCA TGGAGTGAGA
AGTGAGACAA CGTATGTATC CATAAAATAC CCTCTCCAGA CATGGGCTCA TCATTTCTTC
TAGTGGCGAC GCCTTTGTTC TTTACCAACA ATCCTTCGTC AATGATCTTG ATGAGTTTGC
CACCTGTGTA TTGGAGGACA AACGTGAGTG TCCCCATAAA AAGAGTTTCC GGATATCCAA
TTCATATAAT TACTCCAGCT TTATCCCTCC AACCTGAAGA CGCTCTTGAG GCCAGCAAGA
TCGCCACTGC TCTGCAATAC TCTTTCCGAA ACAGGGTGGC TGTTGAGTTT GACGACGAAG
GAGAGCCTAT CATGCCTTAA
 
Protein sequence
MPVATTPDTK LKLAVIGLGR IGAVRARILS NYAPKIHVVA ACDSKPGSDV WAAENLPSHV 
QFFSDPEELF QKSGAQAVLI STVTATHAPL VLRALELGYH VMCEKPIAVD IATTKQVVEA
ARAKPELKFL VPFCRRFDAG ELGDIHAVES WCLDAQDPTG FFVQFSAMSG GIFVDMGVHD
IDIARYFLNV KKGLINPKKQ VNRVIAFGQT AVYHDLQKFG DADNGYGIVE FANGKILTSH
IGRTLTNGHE SSTRVFGTKG TAVVNAESPA NRVQLRDAHG VRSETTGDAF VLYQQSFVND
LDEFATCVLE DKPLSLQPED ALEASKIATA LQYSFRNRVA VEFDDEGEPI MP