| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNE00840 |
|---|
| Symbol | |
|---|
| ID | 3257920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006687 |
|---|
| Strand | + |
|---|
| Start bp | 220470 |
|---|
| End bp | 224673 |
|---|
| Gene Length | 4204 bp |
|---|
| Protein Length | 1027 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638256670 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_570812 |
|---|
| Protein GI | 58267312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.515012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTTTGTCTTT GTTTCTTCCT TACCCTAATA GCTTCTCAAA AATCACCCGT GCCTTCCTTC
TTCGTCCGCC AATGTCGCCA ACATCTTTTC AGAATTCGGC CGGCCCTGGC CCTCTTCTCA
ACCAGCACAG TCGTAGTCCA CCTAGTGCCA GTAATGTCAG CAGCCGTGAC CGTCAAGGCA
CAGCGGAATC AGATATAGAA GCCAGAGAAG AGAACGGTGC CTCTAAAGCT CCACTTCGTA
AGAAGCAAAG GAAGCAAAGG CCTGTGTTCA GTTGCGCTGG TATGTACATA TCTTCATGGT
CTGTCTTGAT TGCCAGATCA TCGTTTGATT TTGCTGACAT TCTTTTAGAA TGCAGGAGGC
TCAAACTCAA GTGTGATCGT CAGGGTGAGT GATTTGATAC TCTCTATGCA CCATACCAAA
CTCATTTATC CAGTGCCATG CGATAACTGC GTCAAGAGAC GTTGTCATTC TATTTGCCCC
GATGGGGTTC GCGTTACCAG ACAGTAGTAC GTCATTTACA CAGTTACTGG TGAGCTATTT
ACTGTCGCTG ACGCAAATGA ACCCAGTCTC GCAAATCCTG ATTCCGCTTT GCTTACGCGT
CTTGAGCAAC TGGAGGGCAT CGTATCTAGA CATAGATTGG ATCCCGTCAT TACAGAAGCC
GCATCGGCGA AAGAAACTAA CAAAACTCAA ACGCCCTCAG GAATGCAGTT ACGCTCCCAA
CAGGCGACAG GGAATATAAA TGGTAGTTCC CGAAGTCGCG GACAGAATTC TCCTCATATG
GCTTCGCCTT CTTCTGTGGC CGCTCAGCCT CCAACTAATC GACCAGAAGA GGCATCTTCC
AGCCTGCAGC AGTCAGATGA TGATGACCAT TTGCGAGGAT CTTCTTCATC AGGCCCTTTT
CGGTATGATA TGCTAGAATC CCCGCGTTAC GAGCATCAAC CTCAGCCTCA ACATCTACAA
CAACATCCAC CCCAAACTCA CGCGTCAGAT CTGCAGTTCA ACACTGTTCG CCCCGGTAAT
CCAGATATCT CTCACAGGGT AGAAGCAGTT CATGAGATTA ACAAGATAGT TCCATGCGAT
GGATCAATAC GATTTGATTT TCCCACGCAT TCTACTTCAT CGACATCACC CCCCGCAGCC
GGCCGTCACA GCGACAGTAA CGCTGAACCG CATAGTCATC ATCCCCACCA TTTTGGTCCT
CCTGTCCTAG CTGAGAATGT CGATGTTGAG GAAGAGCAGA GCTATGGTAC TTTGGTGATG
GGACAAGGAG GAACGAGCAA GTACTTGGGG CCGACTGCAG CGAGTGAATG GTTGAGGGAT
GTAAGTCTTC ATGACTCCTA CTTGAATACG TACGCTGCTT ATTTGGACAG CAAGAGACAC
GAGACCACGC TGAGTCGCGA GATCAGTCTC GATTACCATC TCCTGAGATC CCAGAGGCAT
CGGTGCCCCC ACACAATCTA CGCCCCACAG CTGTTCCTCA TTCATTTCCT TTTCACACTT
CAAAGACCAA AGTTGTCTCA TGGTCGAGAT ATGATCTTCT CTCCAGGCTA CCTGATAGAT
ACTACGCCGA CATGCTTGTT GACAGTTACT ACCGTTCCTT CAGCTGGCAG TGAGTAAACC
TACTGTCTTG GCATGAATCT CCTTCGATGC TCATACAAAT GATGAAGTTA CGACATCTGC
CCTCGTTCTG AATTCCAGCC TGTCTACGAA GAGATGTATC TCTTTCGGAT AACAAGCATC
ACATCTCCTC CTGAACCTCT CCAGCGACTT GGCCGAGGCA GGATGAACTA TCAGGACCTA
GGTCTTGTTT TTATGGTCCT TGCTTTCGGC ACATTGCATT GTCTTGAACT GGCGCCCAAT
GATCCTACTG CATACGAGCT GGCTTCTGTA GCTCAGGTCG CTTTGTCAAA AGGCGATCTT
CTGTCGCGAC CTTCAATTTC AGGGCTTCAA GCCTTGGTAC GTTCTCATGT TTTATCTTAC
GATTGAAGAC CAATCAGGCT GACTGTAGTT TCTTTTAAAA AAGCATATAT TGGCCCAATT
CAGTAACGAA TCTGAAGAAG GGCGAAATGG AGATGCATCC TGGCCATTAT GGGGTCTATC
GATGAGGTTG ATACAGGCGG TGAGTTTGAT GGCCCTGAAA TATATCTGAT ATTCCGCATG
CTCCGAATGC TGATCGCCGC TGTATCTAGA TGGGTCTTCA TAGGGATGGT GCCAGATGGG
ATCTTGATCC AGAACTTGTA GAACAGCGAC GGTCAGTCAT TTCCTGATTC GACTGCCTGC
CATGTGCTGT CATTGATGCG CAAACATTCA GCCGAGTATT TTGGGAATGC CACAGTGCCG
ATATCTTCCA AGCAAACTGT AACAGTCGGC CGTTAGTTAC ACAGTTCATT GCCGTTATCG
ATTACTGACA TTGTTTCGCA CACTATTAGT AACACTCTCT GGCCAGGCGT GTATGACACC
GCGTACCCTT CACAACCCCC AATTCATATC GAGAAGGACT ATTATACTCT GAAGTTTGAG
CTCAGTCGCA TAGCTGCATC GTGAGTGGCA ACTAATAACT TTTAGAGCAC CAATCTAGTA
TGTTCGAGCC TGACTATCCC GGTGCAGAAT CCTCGGCTCA GCAACTAATG TTCAAGCTCC
TCCTTATTCT ACCATTATGG AGCTCTCTCG TCAAGTGTGG GTATCACTTT GCCCTCCTGG
TGGATTTGGG TCGCTGATAC TAGGTTCCAA CGAACAGCAC TGATTTCGAG CGTCAGGTAC
CTTTCAATCT GCGATGCCGA CAAGCCCTCC AGGCTTTGCC TAGTATCTAT CCTGATCCTC
AGGCTGCAAT TGACAACAGT CCTGAAATTA GCTCGAAAGA ACTTCATAAG ACTTTTCAGG
TGAGCTTTTC GGGAACAAAG CTGTATGAAG ATCACTCAGC CGGGAGCTCA CGTTGGCAAC
AGAAATTTTT CTTGTCCATC AGCATCTCCG AAACCCTATT ATTCCTCCAT CGTCCCTACT
TCGTTCGTGC TCTCATCAGG ACCTCTCCCG ACCCCTCACA GTCCGTTTAC GCGCCTTCAT
ATCTCACAGT TGTTGAGAGG TGTAATGTGA GAATTTGTTC ATCTGCCGGA TGGCCACACT
TCCAAGAAAG CTTACATTTT TGCTTGTAGG CAATCGTTCA ATGCGTTGTC ACGATCCATA
AAATCCATCG TAACGTTTCA ACCCGGCACT GGCCACTATG GGCAAGTTCC TATCGATATG
AGTTAAAATT GATGGCTGAT CCTTTTAGCG CAGTATCATG CTTTCAATTC TGCCGTCTCA
ATGGGTACTC TGATATTTAA GTCACCTCAA AATCCTCTGT CGGATTTTGC CCTCGGTCTA
ATCAACACCG TGATTGAGGC GTTCACGTCG GCTGTCCAAA CGGGCTCTTC TCCCCGCCTG
TCCACCAACC TCCAATGGCT AATTAGGCTC AGGCGTAGAT GCCAAGACGC TATTGACAAA
TCCAAATGTG AGAGTGCCGG CCAACAAACA ACCAGCGATA ATAGCACCTT TGCTCTCCGT
GAGGGCGATA CTGGCGACAA TAGCGATCAA GATGACCCAG ATAACTTTTC TCTTCTTGGT
TGGAGGACGA GGTTAATCCA GCGTGCGGCT TTTGGTGGAC AAGTGGCCAA GATTATTTCG
CAGTCCACGC CATCGCAGTC AAATGACAGT TCTCCTCAGA TTATGTCCTC GAATATCAAC
CTGCTTCCAG ACATCTTGGG TCCTACGATG GGTGGTTTAA CAGGAGCAGG TGTCCTGAAT
CCAATACCGG GAGCCGAGAA TATAGCGAAT AAGCAGATGT CATCGAGTAC GAGCACTGCG
GGCGATCAAA CTGAGATTAA TGAAACTTTT ACAAATCAGC TTGTGAGTCT ATACCGATCA
AATAGTCCTT CCGAGAATTA ATCTCGCGAG GCTGGTATAA TTGCTTGGGA CGCAATGCTG
ACGTTTAAAA CAGTTGCAAC AATTCTGGGA GCCGATGCTG CTACAAGATG CTCCTAATGT
AGGGGATAGT ACCTGGGACC CATTCCAGAC GGTTAACTGT TGGGATTGGA ACATGCATCT
TTATAGGGAA GAAAGGTCTC ATCAAGCGCC CAATCCAGAT ACGCATGCGT GAAGAATGTT
GTTGTGGTTA TTGGCGAAAT TTGTGTAATG TTATCATTTA TATATTGGGT GCGACTGTGT
TCGG
|
|---|
| Protein sequence | MSPTSFQNSA GPGPLLNQHS RSPPSASNVS SRDRQGTAES DIEAREENGA SKAPLRKKQR
KQRPVFSCAE CRRLKLKCDR QVPCDNCVKR RCHSICPDGV RVTRQYLANP DSALLTRLEQ
LEGIVSRHRL DPVITEAASA KETNKTQTPS GMQLRSQQAT GNINGSSRSR GQNSPHMASP
SSVAAQPPTN RPEEASSSLQ QSDDDDHLRG SSSSGPFRYD MLESPRYEHQ PQPQHLQQHP
PQTHASDLQF NTVRPGNPDI SHRVEAVHEI NKIVPCDGSI RFDFPTHSTS STSPPAAGRH
SDSNAEPHSH HPHHFGPPVL AENVDVEEEQ SYGTLVMGQG GTSKYLGPTA ASEWLRDQET
RDHAESRDQS RLPSPEIPEA SVPPHNLRPT AVPHSFPFHT SKTKVVSWSR YDLLSRLPDR
YYADMLVDSY YRSFSWHYDI CPRSEFQPVY EEMYLFRITS ITSPPEPLQR LGRGRMNYQD
LGLVFMVLAF GTLHCLELAP NDPTAYELAS VAQVALSKGD LLSRPSISGL QALHILAQFS
NESEEGRNGD ASWPLWGLSM RLIQAMGLHR DGARWDLDPE LVEQRRRVFW ECHSADIFQA
NCNSRPNTLW PGVYDTAYPS QPPIHIEKDY YTLKFELSRI AASILGSATN VQAPPYSTIM
ELSRQVYLSI CDADKPSRLC LVSILILRLQ LTTVLKLARK NFIRLFSISE TLLFLHRPYF
VRALIRTSPD PSQSVYAPSY LTVVERCNAI VQCVVTIHKI HRNVSTRHWP LWYHAFNSAV
SMGTLIFKSP QNPLSDFALG LINTVIEAFT SAVQTGSSPR LSTNLQWLIR LRRRCQDAID
KSKCESAGQQ TTSDNSTFAL REGDTGDNSD QDDPDNFSLL GWRTRLIQRA AFGGQVAKII
SQSTPSQSND SSPQIMSSNI NLLPDILGPT MGGLTGAGVL NPIPGAENIA NKQMSSSTST
AGDQTEINET FTNQLLQQFW EPMLLQDAPN VGDSTWDPFQ TVNCWDWNMH LYREERSHQA
PNPDTHA
|
|---|
| |