Gene CNE00680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNE00680 
Symbol 
ID3257767 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006687 
Strand
Start bp183135 
End bp183968 
Gene Length834 bp 
Protein Length155 aa 
Translation table 
GC content47% 
IMG OID638256654 
Productconserved hypothetical protein 
Protein accessionXP_570789 
Protein GI58267266 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.310644 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGTT TGGACTTGAG AATACTGCAT GATCGAGCTC ACACGCTACT TGCCATCAGT 
CTGTCACATT ACATACCAAC CTCGGGGATA TCAAGGTAAT TACAGTGCCA GTTAATCTAT
ATCTCGTTAA AAAGTTGGCT AAATTAACTC ATAGATCGAA CTCTTCTGCG AAAGTGTCCC
AAGAACAGCC GAAGTCCGTT ACCCAGTCGT CCAGCCGTAA ACTCGAGCTA ACATCTTGCT
GTAGAACTTT CTGGCACTTT GCGCCTCTGG TCAATATGAT GGCACCCTAT TCCACAGGAA
TATTCGAGGA TTTATGATTC AAGGAGGAGA TCCGACAGGG ACAGGAAAGG GTGGGCAGAG
TATTTGGGGA AGACCGTTTT CAGACGAGAT TAGGCAGACC CTGCGGGTAA GTCGGAATGG
TGGAATGGGT ACGGGGTAAG CTGATTCCAT GTGTGTGCAG TTCAACAACA GAGGCATGGT
GGCGATGGCC AATGCCGGTC CAGATACGAA CAAATCACAA GTGCGTCTTC GTTCCCTGGA
CCTTCGCGCA GATGATGCTA ATCGTATAGG ATTAGTTTTT CATAACATAT GCGAAGCAAC
CAAGCTTGGA CGGGAAATAC TCTATTTTTG GCAAGTGAGT GAGACAAACC AAAGTGATAA
CCGGAGAAGG AACATTAACC AGTTTGCAGA GTAATTGACG GCATGGAGAC CCTCGATTCC
ATGGAAAAGA CTCCTGTTAA CCCCAAGAGC AGACCGTTAC AAGAAATCAA ATTGCTCAAC
GTCACCGTAC ATGCCAATCC CATAGCAGAC CAAGCAAAGG GAGGATTAGC CTAG
 
Protein sequence
MIELFCESVP RTAENFLALC ASGQYDGTLF HRNIRGFMIQ GGDPTGTGKG GQSIWGRPFS 
DEIRQTLRFN NRGMVAMANA GPDTNKSQFF ITYAKQPSLD GKYSIFGKVI DGMETLDSME
KTPVNPKSRP LQEIKLLNVT VHANPIADQA KGGLA