Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE00570 |
Symbol | |
ID | 3257796 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | + |
Start bp | 151210 |
End bp | 153530 |
Gene Length | 2321 bp |
Protein Length | 634 aa |
Translation table | |
GC content | 59% |
IMG OID | 638256643 |
Product | conserved hypothetical protein |
Protein accession | XP_570770 |
Protein GI | 58267228 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.351381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCGCA CTAACCAGAA GCGCGACGCG GACAGGCGTG GATGGCCGCC GGGCTCTGCC GAGTGCCACT GCGCATACTC AGCCCCGGCC ATCGGCTGCC TCTATAAATA CACCTCCACC TTTTCTTCTC TACTCCATCA GCCCACCATA ACCCTCCTCC GCCTCCCACC CGCTGCCCCG CGCATAGCCG CCCGCCTGCA ACCGCCCATG GCCTCCATCT CTCTCCCGCC CTCGTCCTCC CCCACCCCGC CCCCGCCGGC CTCACGGAAC ATCCCCAAAG ACTTCCGGTC CTCCCTCGCA GCATGGTGGT CCACGTCCTC CTACAAGGAG ACCCGTGTCG CCGAGGAGAG GCTGCTCAGA CGGCTCAGCA TGTACCAGCC CGCTCCCGCC GCAGCGCCGC CCCCGCCGTC GACAGCGCCC GCCGGCGTGC AGGAACAGGC AGGCGGCAGA TCGTGGTTTG GGTTTGGGAC GAGCAGCAAG AGTACAAGTA CGACGAGCCT TCCAACTCAG ACTCACGCTG CAGAAGACGT AGCGCCTCGG CCGCAGCCAG TCGCCTCAAG CTCAGCGCCG TCGTCAGGCC TCGTGGCCAC GCTTCGAAAC GTATTCATCC CCACGCCCGA CCCTGCCGAC GCCCCCGCGC ACCCCGCCGA CCCTCGCGAC CTTTCCCCGA GCAGCAGTGC CACCTCGTCT GTTCATGATC CCACCCACGA AGAAAAGAAA TCCCACCACC GCAAGTCGAA ATACTGCAAG ACGGACGAGG GCAAGCTCCG AGACTATATC AACACACTGG AAATCAGCAC GCCAGCGAAC CAGGATTCCA AAGAAGCGGT CGTCGTCTTG CACGGGTACG CTGCTGCTCT CGGGTAAGCC CTATTCCCGC CCTGCCCGGT TTTTTTTTTT TGATCCCAAT TCCGCCTTTC TCTAGTTTCT TCTTCCGTAA CTGGGAATCC ATCGCCACCT CTTCTGCCGC CACCTCCCGC CGGACATTCT TCCTCGACTG GCTCGGCATG GGCCTCTCCT CCCGCCCATC CCCCTCCCTC GTCTCTTCCC CCTCCAACGC CCCCATTCCA TCCCGCGTCG CCCGTGCCGA ACACTTTTTC CTCGCCAGCT TGGAAAACTG GCGAGAACGT GTAGGCGTCG AGAAAATGGT CCTCGTCGGG CATTCGTTGG GCGGATATCT GGCGAGTGCT TACGCCGTGA GGTACCCCGA GCGCGTCTCT GGTTTGGTCC TCGTTTCGCC CGGGGGGATA CCGCATGGGC CAGAGTATGT CCGGTACCCG TTGACCGCCG AATTGTCCTC CCAGACCCGG CAGGCTCAGA GGCTCAGAAG GGAAGGGAGC GAGACGAGCC AGGAATTGGA AGGGGCGGTG GACGCAGCGG AGATGGAGCT CGGTACAGGT CCAGGGGGGC GTGGGAGCGG AGGCAAGGAA GGAGCGAAAG GGGAAGCGAA AGAATGGGAA GAACGACGCG AAGCCTCGGT CGTCCGACGG GGAATGATGA AATGTAAGTG CCTTCCCCCC CACCCCCAAG AAGAAAAAAA CCGTAGACTA ACCCACACTA GTCTTCGTAT GGGGCTGGGA ACGAGGTCTC TCCCCGTTCT CCATCCTCCG CACAGCCGGT CCCCTCGGTC CCCTGTGGGT AGGCAAATAC AGCTCTCGCC GATTCGCAAA ACAGACAGAG GAGGATGTAA GGGATTTACA CGCGTACATC TATGGGACGA GCGTGATGAA GGGGAGTGGA GAGTATTGTA TCTGTAAGTC CCGACTCCCG CGTTCCCCGT CACCCTCACT CTCACTCTCG CCTCCATTTG GGCTGCAGCC ATATGACAGC TAATAGCTAA CGAATGTCGG GGTGTACAGC ACATATACTC GCTCCAGGAG CATACGCGCG GATCCCCATT CTGGACCGTA TCGACCGTCT CAAAATCCCA GTCACATTCA TGTGTACGTC CATCTCTTTT GTTCCCCTTT GTATGTCACA GCGTATACTG CATCTAACCA ATTCCTTTTT TTTCTTTCTT CCCATTATGA TTATAACAGA CGGTGACAAT GACTGGATGG ACGTACAAGG CGGCCACGAT TCTGCTGCCG CACTGGCCAA AGCGGGCAAC CCCAACTGTT CAGTCCACGT CGTACCCGAG GCAGGACATC ATCTTTATCT GGATAACCCG GAAGTGAGCA ATAGGTTGTT GGATGAGGCC ATTAGGGCTG TGCCAAAGGC TTTTTAGATG TACCGGGTGA TAGATGGGGA ATAAAGTGTA TATAGTAATC TTCTCTTACA TGTTGTGGAT GATGGGTTAT ATGTGAACGA GTAGATCTTT T
|
Protein sequence | MHRTNQKRDA DRRGWPPGSA ECHCAYSAPA IGCLYKYTST FSSLLHQPTI TLLRLPPAAP RIAARLQPPM ASISLPPSSS PTPPPPASRN IPKDFRSSLA AWWSTSSYKE TRVAEERLLR RLSMYQPAPA AAPPPPSTAP AGVQEQAGGR SWFGFGTSSK STSTTSLPTQ THAAEDVAPR PQPVASSSAP SSGLVATLRN VFIPTPDPAD APAHPADPRD LSPSSSATSS VHDPTHEEKK SHHRKSKYCK TDEGKLRDYI NTLEISTPAN QDSKEAVVVL HGYAAALGFF FRNWESIATS SAATSRRTFF LDWLGMGLSS RPSPSLVSSP SNAPIPSRVA RAEHFFLASL ENWRERVGVE KMVLVGHSLG GYLASAYAVR YPERVSGLVL VSPGGIPHGP EYVRYPLTAE LSSQTRQAQR LRREGSETSQ ELEGAVDAAE MELGTGPGGR GSGGKEGAKG EAKEWEERRE ASVVRRGMMK FFVWGWERGL SPFSILRTAG PLGPLWVGKY SSRRFAKQTE EDVRDLHAYI YGTSVMKGSG EYCISHILAP GAYARIPILD RIDRLKIPVT FMYGDNDWMD VQGGHDSAAA LAKAGNPNCS VHVVPEAGHH LYLDNPEVSN RLLDEAIRAV PKAF
|
| |