Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNE00340 |
Symbol | |
ID | 3257757 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006687 |
Strand | - |
Start bp | 78065 |
End bp | 80751 |
Gene Length | 2687 bp |
Protein Length | 245 aa |
Translation table | |
GC content | 49% |
IMG OID | 638256616 |
Product | hypothetical protein |
Protein accession | XP_571098 |
Protein GI | 58267884 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0166262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AGAAGTGTCA GGAAACCGAA GAAGGAGGGA CAAGCGGTGC TGGTGTTTTG GTAAGAGTCA AAAGGGACTC AGCCACCCGT GTTCATTTTA TGTGATTTTG AACGCAAAAC TGACAGTTGT TCGTATATCC GATCCAAAAA TCAGTCCGGT GGACACTTCA CCACACGAGC TACATATGAG TCAAAGAACA AGCAATGGTA TAGGTTCTGC GAGCACATGG GTTTCCAGCA CCGGTAAGCT TGCTCTGTTT TAGGTCTGCC AATGGCATGA GGGGAAACAT TTACCTGATT CGTTCCTATA GGGACACCGT AACTCCTGCC AATGCCATAA TGTACATCTG GGATTGGGTG CTCCGATTGC CTCGCAAGCA TGCAGGTGAG GATATTACTT GCACATGAGC CGTACTGTAT AGACTGACGA TTAAAAAGCT TTGGATAACT TCAATCAATG CTTAATGCTG AGGGAACCAA TGAGCAGACA ACGCTTCAAG CGGGGTCAAC CAGCGAGACT GAGGCAACCG GCGAGCAGGA GGCCAGTGGG GAGGGGGCCA ATGATGCAGA GCGACGCAAC GTCGCTGTTC GTCAGTTGGA AACCTCCTTC GATCTGAGCG CGGTAGGAGC AGGATCGCGA GGTGAGCTTG TGTATCATTT TTATGTGTGG AGGCCGGGAG TTTCAGCTGA GGCTTGTGTT TCCTTTTAAA AGAGGCAGCT GCGGGCCGCC TGCTCAATCG CGAGCTCAAA CCCAGGCCTA CGTTGCAGCG CTAGTGGATT TGGGGGAAGC TCTTATCAAG GTGGGTTTGA CTTGGACACT TCTGCCCAAC TCCCCCACTG AGCAAACATT TTCAGTGTCT TGTTCCTGTG ATCAAAGATC TTTTCCCTCC CTGTATAGAA ACTGTTTTGA TTCCTCTGGT CGACAACGTG TTGAGCGTGT ACAATCTTGC TTATCTTGAT CAACACACTG ATCGGACGCT GAACCTTTTA GATCAGGCAG TGCATAAGTT CAGTCAAGAA GCACGCTCAC TTCACAGAGA ATCAATCGCT CTGCGGTCTG AAATCCTTGC AAAAGACCCA ATCGGCGTGT ACCCTCCTAT TCCTACTCCA CCCCAAAATT TCATATGCTT GGATCGTTGA ACAACTACAC GATCGCCTTT GTAATGGTGA GTGCAGTAAG TTCAATACAT ATATAAGTCC ATGATCCTGA CTCCATGACT GGCTCTTCAG ACCTTGGAAG AGACTGAACG TGGTGCCAGA ACTTCAACAC AGTCTGGAGC TCAGCACTTG CGAAACGCGA TGGGTTTGGC AGGACCAGAA CATAGTCATC TTTGGCGTAA GATCCACGTG AGCTATTAGT TCGTCGTCCT TGGACGCAAC ACGCTGACAA TATTATGGAC ACCAGGCGAT CAACCACTGG CTATGTCTTC AAGGTCGAAC AGCACTGTGG GATGAGCTCA AGTCCCAATA CTTGGCTGCA GTAGGAGCAA GACAGGCGCA TCTTTTGCAG CAAATGTGGA CATCGCCTGT GATGGCGGGA GAGGATCGAA ATCCTCGAAC GTTTATTTCT CGTGGGAAGT AAGTATTGGT TTTCTCGAAA GGACGTTTCT CCCAAGGCTC TAGCCCGTGC CAAGGAATGG GCTGACCGCT ACGGGAAGGC CTACCGATCC GACGCAAACA ACTGGTGTCA CTGTAAACTC TCAGGTATCC TCAATGCCCC TTCACACTTC TTCTTCACCT CCGCTTTCTC CGTCGACCTC CGCTCACTCA CCTGAGCGAC AAGGGAAGTC GGGGGCTAAG ACTACAAGGC GTTACAAGGG CGAAGATCGC CGAGCAGTTG ATGATGCTCT GGTCAATACC GTAGCTGCCA TAAAAATGTG AATTGTCACC ACTATATCAG CTCTTCTTGT TTGCCAGCAG TACTGACTGA GGGTTTCGAT AGTGAATATG AACAGAACGA ACATCACGTC ATCATCCTTG GTCATGAAGG CGACAGCGAT GGCGCCGAAG AAGTGGTGAA GTCAAAAAAG GAGGGAAAAC AAAAGAGTGG AGGTAAGAAG GAGAAGAAAA TGCACAAGTT TGAGCTGTGC AAAGGTTTAT GGCAGGAGGT AGAGAAGAGG CTTCAAAAGG ACGATAGGAT CGTCAATCTG GGCGCCAACA ATCGTTCTTA CTGGGCTGCT ACGTTTCAGC AGCTCAGGAG CGAATGGTAT AACCCTATTG ACCAGGTCAT AGATAAGTCC GGCAGAAATT GGATTGACAA TAAACTGCAG TTGAGCGAAG AGGACTGCTA GCCAGAAACC TTCAATACTG ACAAAGCAAA AATCAATCAA CAATCGGCGA CATGTGGATG ATTTCGCAGG AAAACTCAGC AAAAGCATTC AGACCCCGGT GATCAGGAGC TATTCTCTCC AGCCGGAAGA TGAAGAGGCC AATCGTAAGG TTTTGCAAGA GGAAAAGAGG GTAGAAGAGG ACATTGTCAA GTTCAGGGAG GGGGGTTACC GAGCCGCTGT GTCCGTTTTA TTATCAGTCA CTGCCGACAG AAGGTGAGAA TGTATTGGCC ATTTCTGTGA CGAAGAATGT ATGGCTGATG CAAGAGTTAC ATGCATATCA CACTCTTCCC TACTTACCAA CTTTGATTCT GCAAATGTTA GAAGTGAGGC GAGGCTTCGT TCGTTATATA ACAGGGATGT TGCATAG
|
Protein sequence | MLGSLNNYTI AFVMTLEETE RGARTSTQQA HLLQQMWTSP VMAGEDRNPR TFISRGKPTD PTQTTGVTVN SQVSSMPLHT SSSPPLSPST SAHSPERQGK SGAKTTRRYK GEDRRAVDDA LVNTVAAIKI EYEQNEHHVI ILGHEGDSDG AEEVVKSKKE GKQKSGGKKE KKMHKFELCK GLWQEVEKRL QKDDRIVNLG ANNRSYWAAT FQQLRSEWYN PIDQVIDKSG RNWIDNKLQL SEEDC
|
| |