| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND06160 |
|---|
| Symbol | |
|---|
| ID | 3257111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | - |
|---|
| Start bp | 1699233 |
|---|
| End bp | 1702401 |
|---|
| Gene Length | 3169 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | 638256556 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_570556 |
|---|
| Protein GI | 58266800 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GAAAGCTTGC ATCCCAGCAT CCATCGCAGA CGTACACCTG TACCATCGCT GTCATTTTTG
CTATTTGTTT GTCCATTCTT TTTTCAGTGT GTTTTATTTA TTGCAATCGA TCCTTTGTCT
AGCAGAAACT CCCCATTGCA TAATACCACA ACATTTTTCT TGATTACCCA TATTTAGAGA
GCTCAGAACA CGTGAGCACC AAGAAGGATG TCTAGATATA ATGATTATAG GAGGTATACA
CGGTCCTCAG ATAACGGTAG CCTGGTGAGT GGGAACCCTT GTCTTCCTCC TACCTCTTCT
TCTGTATCAT TTCCCGCCAG TAGGGAACAA GACGCGTCCC GTGTAACTGC GGATAAGTCT
AATAAGGCTA TTTTATCGTC AATGCGCGAA GATGTGTGCT TTGTGCCCTG AGGTGTTGGT
TGTTGGTGTG GGGCCACAGT GTTCCATCAA CATCTCCATA CCGCTTACTT CCACGTGTTG
ATTCCATAAT CTCTATCCAT TCGCCCCTCT TCATCCACAT CGTTCATCGT ATTGCTTGAC
TGGTCAGCAA TTGGCTGAAA ACGACCATTG TTGTCTTAAC TTTTTACATT TCTCTTGACA
CCCTCGATCA TGTCGTACAA GCCTGTGCCG CTGCACGAAG TTGCTTCTGT ACCATCTCTT
TCACCGCAAC CTTCTTCAAT TCAGTCATCT GCACCATCTC ATGAGGTACC TCTTAACGTG
ATTCTCCCTC ATTTCTTATC TTTTCTTCTC TTCCTCCATT CTCTTTCTCA TCTTATGGAA
ACCACTGACT CATTTGACTT ACTTCGTACC ATCTTAGCCC ACGACCATTC AACAATATGG
TCCTTCTGCT TCTTCAACAA AGCCTACCAA CAGCCTTTTA TCGCCAGCAA GATTGAGTGT
TAGCTCAGCA AGCCTTGATA GCAGAGCAAA ATTGGCTGAA CTGGGATCAG GAGCTTCGGG
AGAATGGGGG CCGATGACGA CAGGGCCGGA GGAGGATGAT TGGATGCATA ATCCAGATCC
CATAAAAAAT CGTAACGTGA GCACAGCCCA GCACGGACTA CCAGCAGCCA CAAGTCATTG
GCCTTTGGCT GACAGTTTCA GTATGATCGA GGAACGATAT TTACACCACG TGGCCTCATT
AACGTCGGGT GCCTCGTCAT GCTTATTCTG TGCCTGGTGA CCCTTTTCGC AGGGTACCCG
ATCATCACCC ACTTCACAGA CACAGAGATC AAGACAAACG GCGCGTACAA CATAGGGGGT
ATCAACTCGA CTGGCCAGGT ACCTCTTATA TCGAACATCC CTACTGTGAT TGACAGCGAT
ACACCAGTAG ACAAGTACAC GCGAACAGGC TTCGACGGGA AGACATATAG TTTGGTCTTT
TCGGATGAGT TTGAAAAGGA AGGGAGAACG TTTTTTCCTG GTGACGATCC TTTTTGGACT
GGGGTGTAAG TCTATCGCTT ATGATGCTTA ACAAGATGCT AACGAGGTGA CAGCGATATC
CACTACTGGC CAACAGGCGA CTTTGAATGG TACGACCCCG CAGCAATCAC CACTAAAGAT
GGTCATCTAG TCATCACACT CGATCAGCAA AACATCCATG ACTTAAACTT CCGATCCGGT
ATGCTTCAAT CATGGAATCA AATATGTTTC CAATACTCTA TCTACATTGA AACCTCCGTT
TCTTTACCGG GCAATAACAG AGTTGGCGGG TTTTGGCCCG GTATATGGAT GATGGGTAAT
CTCGGGAGAC CAGGATACGG AGCCACGACA GACGGGACAT GGCCTTATTC GTACGATTCA
TGCGATTACG GGACGCTAGC GAACCAGACC AATCCAGAAG GCACTGGGCC AGAGGGAGCT
TTGACATCTG GGTCAGACGA TAGTGCCATT TCCTAGTAAG TGCTCCTGCC TTGTCTAAAA
TGAAGCTTTA CAAAGTTTTG GCAAATGCTA ATGTGATAAT ACCTAGCCTG CCTGGACAGA
GAATGTCTTC GTGTACTTGT CAAGGAGAAG ACCATGCAGG GCCAGATGTG ACTTATGGAC
GTGGTGTACC AGAGATCGAC ATCCTCGAAG GACAACTTGA CCTGTCTGTT GACAAGGGCC
AAGTTAGTCA AAGTGCTCAG TTCGCTCCCG TACGTCTGCT ATTGAACACT TCCTCTGATT
TTGAACTATC AGCGACTGAT GATTGTGTCC ATGTCGATAG TTTGATTATG GATACCAATA
CCTCAATACT TCTAAAGGAG CTATTCAATA CGATACAGAC ATCACAATGT GGAACTCGTA
CAAAGGTGGA ACATATCAGG AAGCGGTATC ATCTTTGACT TATATCGATA GCGATAATTA
CATGGGGACT AGTGGCGGGT TCGGTATCTA TGGTACGTGC CTAGAAGTTC ATCAAATGTC
ATGAACCATA CTTCTCTGAC ATTTTATTTG GCAGCATTTG AGATGTTTAG CGATCCCAAC
GATAGAGACT CGGGTTACAT CACATGGGTT GCGAACGGTG AGAAATCATG GACGATGTAC
CCTGCCGCTG TGGGACCCTT GTCCTCCATG AATATCGGTC AACGACTGAT ATCTGAAGAG
CCAATGGCAA TGGTATGTCT CATTGCACAC CCGTCTACGT TATTTTATTA TTGAATTCTG
GCCTAATTTC TTGCTCCTCT CCCACAGGTC ATAAATTTTG GGATGTCCAA TAATTTTCAA
GCTATCGATT TTAGCAACCT CATCTTCCCC TCGGAGATGC ACGTTGATTA TGTGAGGGTG
TACCAGCGGT CAGAAGGAAG GATGGGGTGC GATCCCGATG ATCGACCGAC TGCCGCTTAC
ATTGAGAAAC ACGCCAACGC ATATAATAAT CCTAATTTTA CAACCTGGGA TATGGCCGGT
TATACTGTGC CTGTAAATTT GCCCTTGTAT TTCAAAAACG ATGGTACGGT CAAAGGCTGA
CGATGACATT TTAGAAAAAC TCACTTATTG ACTCTTGTTA AATCACGACT TTACGACTTG
ATACGAATTT CCGCAATCGC AAAAGAACAT ATGTCGCTCT CTAATTAACA CCATGTTAAT
CCTGTAATAT CTTAAAGAAA TAACTGTTGA ACTGTTGTAT ATCTGGGCAA AAGATGTATA
TTAACATTGA TAATGGAGAA GAAAGGACAT ATTGAGTCTC TAACCACTG
|
|---|
| Protein sequence | MSRYNDYRRY TRSSDNGSLP TTIQQYGPSA SSTKPTNSLL SPARLSVSSA SLDSRAKLAE
LGSGASGEWG PMTTGPEEDD WMHNPDPIKN RNYDRGTIFT PRGLINVGCL VMLILCLVTL
FAGYPIITHF TDTEIKTNGA YNIGGINSTG QVPLISNIPT VIDSDTPVDK YTRTGFDGKT
YSLVFSDEFE KEGRTFFPGD DPFWTGVDIH YWPTGDFEWY DPAAITTKDG HLVITLDQQN
IHDLNFRSGM LQSWNQICFQ YSIYIETSVS LPGNNRVGGF WPGIWMMGNL GRPGYGATTD
GTWPYSYDSC DYGTLANQTN PEGTGPEGAL TSGSDDSAIS YLPGQRMSSC TCQGEDHAGP
DVTYGRGVPE IDILEGQLDL SVDKGQVSQS AQFAPFDYGY QYLNTSKGAI QYDTDITMWN
SYKGGTYQEA VSSLTYIDSD NYMGTSGGFG IYAFEMFSDP NDRDSGYITW VANGEKSWTM
YPAAVGPLSS MNIGQRLISE EPMAMVINFG MSNNFQAIDF SNLIFPSEMH VDYVRVYQRS
EGRMGCDPDD RPTAAYIEKH ANAYNNPNFT TWDMAGYTVP KNSLIDSC
|
|---|
| |