| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND05940 |
|---|
| Symbol | |
|---|
| ID | 3257448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006686 |
|---|
| Strand | + |
|---|
| Start bp | 1632813 |
|---|
| End bp | 1635242 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | 638256533 |
|---|
| Product | capsular associated protein |
|---|
| Protein accession | XP_570487 |
|---|
| Protein GI | 58266662 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.203249 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCATTCTC ATTATCCATC CCCTATCTCT TTTATATATA TATCCTTCAT TCCTTACCCT
GCGATGCCCC TCCGCTTCAG GGTATCCCTC CTGACCTTCA CAGTCGCCCT CGTCGTCCTC
CTCACCTATT CCTACTTCTA TCTCTCTTCG CACTCGGAGG ACGACTCGTA TTTTGAAATC
GTCGATGGAC CAGGAAGCCG GCATCCATCA TCGCCGTTGG ACAAATCACA TTCACCTCAT
AGAGATCTAG TGCAGTGGTG GTCCCCTTTG GCCAGTGAAG GACCGTTGGG AGTGTTGAAA
TTCTCAGGAG ACGGACTTGT CCGCGGATGG GATGGTGTTT ACAACAAACT AAAATCAGGC
GGTCTGAAAA GAAGCGAAAG AAAGAAGCTC CAGCTCGCAA TGGAGAGACA TCCCATACTA
GAGTTAATGG AGAGGAATCA TGAGCGCTGG GAGAATCTTC TCGCCAGGTA TGTCTCAGCC
TAAATCAGAC TATGCATCAT CATTAACAGC GCTACATTTA GCCAATCCAA GACACTTCCC
CAAGCCGTCA CTGAATACAC TCGAAGATAT GGGCGCCCGC CTCCTAAAGG GTTCGACCAA
TGGTGGCAAT TTTGCAAGCG TAACAAGGTC AAAATTGTTG ATGACGTGAG TAGAGCGCCA
TCTCTCCATG GATCGTATTT TGTGGGGCTC TGAATGAATG ACCATCGGAT CTTGTTTTCA
GTACGACCAA ATCAACCGCG ACATCGAATT ATACTTTGCT CTCTCACCAG AGCTGTTCAG
AAAACGCGTC GATCTTCTCA AAGAAACTCC TCACACTTCG TGAGTCGTCT CATTGTTTTA
AGTTCTGCGA CTGACCTTTC GTAGTCAAAT TACCCTCTCT CCTATTAGGC AATCCTCTCT
CTATGGTGAA CGTGCTCACT CTCTTCGAGC CCGCCTCCTC TTTCAGCTTA TCGAACCGAT
TGCCCAATTT CTTCCTGGAG ATATAACCTT TTCCCTTTCC GATCATGATC TTGGCTCTTG
GCTTCTGGGC GACGACCAAA AGCAGGCCGC GCTCGATGCG ATCCGCAATG GAAGGTACTT
GACAGAAGAA GAATTAGAGG TCTATGAGAA GCGTGAGGGT CGACAAGCTG TCAAAGGTCT
TGCATCTGCT TGTCCTCCCG GTAGTCCCGG CTGGCAGCAT GGTGTGGCCC GACGAGACGG
TCTCGAAATT AAAGAACTTC CTAAAGAGAC TACTTTCATC TACGATCCAG GCCTCACTTA
TGACTACTGT TATACACCCG AACTTGTCGA TATTCACGGT GCTCTCTCAT GGGACTCCGC
CCGGGAGTCT ATGCTCCGAC CTATTTTCCA ACTTTCCAAG TTCGCTCGAA ATCCTGAATT
CCTCACTACT CCTCTTGAGG CGTACGAGAA TTTCACTTCT CCTGCAGCTC AGAAGAAGTA
CGCGCCTTGG GATGAGAAGA CAATTGACAA ACTCTTCTGG CGAGGCAGCT CCACCGGCGA
TTTTTACTCA AAACGACTTA GTAGTCCGAC TTGGCGCCAA TCTCATCGCC CTCGGTTGGC
TCTCAAGACC CAAGCTACTG AAGTTGAGGA GGAAGTATGG GTTCAACGAG GAAAAATGTG
GGAAAAGGAA ACATGGAGTG TCGCGAGATT GAACAAAGCC TACATGGATG TCGGTTTGAC
TGGTGGGCCG CACCAATGCA AAAAAGAAGA CGGCACGTGT GATGAGATGG AGCAGGAAAT
CATTTTTAAG GACCGAGTGG CACCCGAAGA CTCTGCGAAG TACAAGTGTG AGTACGGACA
GTGCTACGGA TGGCTGCAAG CTCACCGTGA ACAGATGTCT TTGACATTGA CGGTAACGGC
TGGTCGTCTC GATTTCACCG CCTTATCATG TCTGGAAGTG TTGTCCTGAA GGCCACTATC
TATCCCGAGT GGGTCTCCGA GTGGCTTACC CCTTGGGTTC ATTATATCGT ACGATCATTT
TTACTTTTTA CCTTTCCACT CGTTGACATT TCTCGCACAG CCTTGCAAAG TTGACTACTC
TGACTTATAC GACATTATGT CCTTCTTTGC CGGTCCTCCC GACGGCCATG CAGGTGGCCA
CGACAATCTC GCCAAGATGA TTGCCGACCA GGCAAGGCAA TTCGGTGAGG ACCATTGGAG
ATGGGAAGAT ATGCAGGCAT ACATGTTTAG ACTGCTGCTT GAGTAAGTCA CTGATGTTGT
TTGACATGAA AGGAGGCTAA GCTGGCCGCC ATTAGATACT CACGGTTACT GGCCGATGAC
CGGAACGAAT GGAGCTATCA GAAGATCTAC ACATAGATTT GATACGCAAT TAGAAGGTTG
TTGCACAAGA CAAGGAAATA CAGGAATAGT CATTATCAAC CTCCATTTAT CAATATTTAG
AATTAAAAGC ACACGTCCTA ATGAATATCG
|
|---|
| Protein sequence | MPLRFRVSLL TFTVALVVLL TYSYFYLSSH SEDDSYFEIV DGPGSRHPSS PLDKSHSPHR
DLVQWWSPLA SEGPLGVLKF SGDGLVRGWD GVYNKLKSGG LKRSERKKLQ LAMERHPILE
LMERNHERWE NLLASQSKTL PQAVTEYTRR YGRPPPKGFD QWWQFCKRNK VKIVDDYDQI
NRDIELYFAL SPELFRKRVD LLKETPHTSQ ITLSPIRQSS LYGERAHSLR ARLLFQLIEP
IAQFLPGDIT FSLSDHDLGS WLLGDDQKQA ALDAIRNGRY LTEEELEVYE KREGRQAVKG
LASACPPGSP GWQHGVARRD GLEIKELPKE TTFIYDPGLT YDYCYTPELV DIHGALSWDS
ARESMLRPIF QLSKFARNPE FLTTPLEAYE NFTSPAAQKK YAPWDEKTID KLFWRGSSTG
DFYSKRLSSP TWRQSHRPRL ALKTQATEVE EEVWVQRGKM WEKETWSVAR LNKAYMDVGL
TGGPHQCKKE DGTCDEMEQE IIFKDRVAPE DSAKYKYVFD IDGNGWSSRF HRLIMSGSVV
LKATIYPEWV SEWLTPWVHY IPCKVDYSDL YDIMSFFAGP PDGHAGGHDN LAKMIADQAR
QFGEDHWRWE DMQAYMFRLL LEYSRLLADD RNEWSYQKIY T
|
|---|
| |