| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CND05590 |
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| Symbol | |
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| ID | 3257074 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006686 |
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| Strand | + |
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| Start bp | 1510648 |
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| End bp | 1513879 |
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| Gene Length | 3232 bp |
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| Protein Length | 879 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638256497 |
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| Product | autophagic vacuole formation-related protein, putative |
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| Protein accession | XP_570474 |
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| Protein GI | 58266636 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.138964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTAAAG GAGAAGGTTA CCTTGATCCC ACTATACTTT CAGTAGCCTC CGGAAGTAGG
AATTCGGGCA AAGGAAAAGA ACGGACGAGG AGAAAGGGTG GTCACAAATA CCATTCATTG
CACGTTCAGG ACGAAGAGGA AGAGGAACCA CCTGAAAGCG ACGCATTGAG GACACGAGGG
AAGGTAGGGC TGAACGCTTA TGAGAAAGCT TTGTGGAAAT GGGTCAACGT GGACGATCTT
GATGGATTCC TACAAGAAGT GCGTCCTTGT GCATTTGAAA TGAAGACGTA TACCTGACCC
AACTTGTCTA GGTGTATGAT TACTACAAGG GTAAAGGCAT CTATTGTATC GTATTAGCGC
GAGTACTCAA CTTACTGTAA GTATTATGTG TTGACATACT GGTCAAGGCG GTGCTGAGCT
GTACTGTAGC ACAACTTTCT TCGTAATTGC ATTCTCTACC TTTCTCATAT CTTGCATCGA
CTACTCAAAG CTCTTTTCTT CAATCTCGAC TGCCGAGGCT GTTGGGCGAT TAGAAGACGT
CCTCGTAGCC CAATGTATCA CCAAGTTTGT CCATTTCAAA CTGTACATAC TGAACAAGAC
TAATTCTTCG GCTTATGATT ATAGGGGGTC ATTCGCTCAT ACCCTTTTCT TAATCATCCT
CTCAGCATTC TTTATCTTTC AGGTCGCCAG TTTTGCCATG TCCGTCCCTC GACTATTGGA
TATGTATCGG TTCTACACGC ACCTTTTAGG TGTCCCTGAT GTGAGCCAAT ACACTTTGCC
TTTGTTTTAT TTGCTGATCG AAACATTTCT CTAGGCGGAT ATACAAACAC TTCCATGGCC
CGAGATTGTG CGACTGATAG GTGACATTAG AAAGCACAAT CCTGTCACAT CACTTTCCAA
CGGCCAGGCT ACAGCACTTG CCGACATGGT TGGCAATGAT GCTAAAGCAC CTGCAAAGAA
GCTTGATGCC CATGACATAG CAAAGTACGC TCAAACATTC CTGAATCTCC AATGTGTGTG
TAGGCTAACG GCGCGCCTTA GCCGGATACT GAGACAAGAA AACTATCTCA TCGCACTATT
CAACAAAGAC CTCCTCGATC TTCGCGTCCG CATCCCGGTC CCTCACGTAC TCACAGCTTT
TATACCCTCT TCTATTCTTA TATCGTCGGC TGATGCCCCT CTACCGTCAC TCCAGTCCGA
ACCCGAGAGA AAGTTCCTAA GCTTTGGCGC AAATCACTTG ACCAAAGCTC TTGAATGGAA
TTTGCGCTTT TGTCTATTGG GCTATTTGTT TGATAGAAGG GGGCAGGTTA GAAAAGAATT
TGTAAGAGAG AAAAGAAGGA AGGATCTTGT GCAAGGGTGA GTGTTGCCGA CCGGGTGCTA
CTCGATTTCG TGTATCCAAG CGCCATTCTG ATCTCAGAGA ACAGATTGAG AAGGAGGTTT
ATTTTCATGG GTATTCTCAA CGCAATTTTT GCGCCGTTTA TCATTCTTTA TCTTCTCATA
TACTCATTTT TCCGCTACTT TGAGGTACGT TTGAAATGGC TGAAGCAAGA AGCTCGGTAT
CTGATCATGA CTTTAGGAAT ATCACAAGAA TCCATCTTCA ATTGGAAGCC GACAGTATAC
GCCTTATGCG CAGTGGAAAT TCCGAGAATT CAATGAGCTT CCCCATTTGT TTGAAAGACG
ACTTGACAGA AGCTACGAAA TTGCCAAGGA ATACGTTGAT CAGTTCCCCA AAGAGCGTAC
TGCTCTCGTC ATGCGGTGAG TGCTTTGCAC TCTTCCTAAT TTTACCTTGG AGCCGTTCTG
GGATCACTAA CGCCGCACCT GGGTAGGTTC GTCGCATTCA TTGCAGGATC TTTTGCCGCC
GTTCTTCTTG TCGCCTCTCT CATCGACCCG GACCTTTTCC TTCACTTTGA AATCACCCCC
CATCGGACGG TCCTCTTCTA CCTAGGAGTC TTTGGGTCCA TACTCGCCAT CTCGCGAGGA
ATGGTGCCAC AGGAGAACAT GGTATTCGAC CCCGAGGCGA GTTTGAACGA AGTTGTTAGA
TGGACGCATT ATCTGCCTGT AGAATGGAGG GGCCAATTAC ATAGCCAAAT GGTGGGTGTT
TTGGCTGCTT TTTTCCCCTA CCTATCGCTC AATGTGAGAA TGCTGATTGG GACATATAGG
TGCACCAAGA ATTCAGCAAA CTGTTCGCAT TAAAGATCAT GATCTTCTTC TCCGAGCTTC
TTTCCGTAAT CCTCACTCCT TTCATCCTCT TCTTCTCCCT CCCGCCATGC GCTGCAGCCA
TCATCGACTT CTTCCGCGAA TTCACTGTGC ATGTCGATGG AGTAGGCTAT GTCTGCTCTT
TTGCGGTATT TGATTTCGCG CGATACGGAA ACGTGGATGC CAACCAACCG GAAACCGGAC
TGGAGGGGGC TACAGGTCCC GATGGCGGTC CTGCTGCTGA TGGGTTCGCC GCAGGAAAAC
CAAGTCGACC GACAACCCGA CGGACCACTT CCTCCAGTCC TTCACGTTTA AAACACAGAG
ATTGGCGAGG CAACGAGAAC AAGATGGAGC AGTCATTCTT GCATTTCAAG GCTACTCATC
CGGATTGGCA GCCGTCTGAT CCCAGCTCGT CACTCTTTCT AGATCGGCTG ATGGGTGCTG
GGACCCGTAA CCGTCATGGA GGTGGGCCAG TGTCCGCAGC GACGGGAGGG ATCTCTGGCT
CGATTTACGG CGGAGGAGGA GGAGGGGTTG GTGGAAGAGG TTTGGGGGTT GACGGATCCG
TGATGGCGGA GATGGAGGAA GAGCGTTTAC GAGCCAAGAG ACAGTCTTAT GAACGTGCAT
GGGCGAAATC CTCTCACTTG CATCGACCTG ATAGTTCTCA TTCCCATCCT TTGCGTCATC
CCCATTCCGC CGCTTCAGAG ATAATTGAAG AAGAAGAAGG GGGCGAAGGG GACAAGGGCG
ATGACTCGAT AGATGGTTGG AGTAAGCGTG TGAAGACGGA CGGAGAGACG GATGATGAAG
AAGAGCGCGA GAGGTTGTGG AAGGATGAAG GTGTGGTGGG TTTATTGCAG CAGGTGTTGG
GCAGATAATA TGTGTGTGTA TATCATAATA ACAGATTATA ATATTCTTTT TAACGAACAA
TCATATAACC GTTGTAGTTA TGAATGTTTG TAGATGTATT TTTCGCGTCG CTGCAGATGA
ACACAAAACA GCGGGAAGGA TAAACAAATC CCAAACTCGT CGACTTACAT AA
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| Protein sequence | MGKGEGYLDP TILSVASGSR NSGKGKERTR RKGGHKYHSL HVQDEEEEEP PESDALRTRG
KVGLNAYEKA LWKWVNVDDL DGFLQEVYDY YKGKGIYCIV LARVLNLLTT FFVIAFSTFL
ISCIDYSKLF SSISTAEAVG RLEDVLVAQC ITKFVHFKLY ILNKTNSSAY DYRGSFAHTL
FLIILSAFFI FQVASFAMSV PRLLDMYRFY THLLGVPDAD IQTLPWPEIV RLIGDIRKHN
PVTSLSNGQA TALADMVGND AKAPAKKLDA HDIANRILRQ ENYLIALFNK DLLDLRVRIP
VPHVLTAFIP SSILISSADA PLPSLQSEPE RKFLSFGANH LTKALEWNLR FCLLGYLFDR
RGQVRKEFVR EKRRKDLVQG LRRRFIFMGI LNAIFAPFII LYLLIYSFFR YFEWKFREFN
ELPHLFERRL DRSYEIAKEY VDQFPKERTA LVMRFVAFIA GSFAAVLLVA SLIDPDLFLH
FEITPHRTVL FYLGVFGSIL AISRGMVPQE NMVFDPEASL NEVVRWTHYL PVEWRGQLHS
QMVHQEFSKL FALKIMIFFS ELLSVILTPF ILFFSLPPCA AAIIDFFREF TVHVDGVGYV
CSFAVFDFAR YGNVDANQPE TGLEGATGPD GGPAADGFAA GKPSRPTTRR TTSSSPSRLK
HRDWRGNENK MEQSFLHFKA THPDWQPSDP SSSLFLDRLM GAGTRNRHGG GPVSAATGGI
SGSIYGGGGG GVGGRGLGVD GSVMAEMEEE RLRAKRQSYE RAWAKSSHLH RPDSSHSHPL
RHPHSAASEI IEEEEGGEGD KGDDSIDGWS KRVKTDGETD DEEERERLWK DEGVIIIFFL
TNNHITVVVM NVCRCIFRVA ADEHKTAGRI NKSQTRRLT
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