Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND03940 |
Symbol | |
ID | 3256913 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | - |
Start bp | 1088100 |
End bp | 1091408 |
Gene Length | 3309 bp |
Protein Length | 921 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256329 |
Product | conserved hypothetical protein |
Protein accession | XP_570632 |
Protein GI | 58266952 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5240] Vesicle coat complex COPI, gamma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCCAGATC GACTCTCCCC CAACTATCAC CATATCTCAC AATCATGTCC TTCAAGAAGG ATGATGAAGC AGGTGGAATA TGTACGTACT CTCTTAACGG CGCAGCTCAC ACCCGCAGCT TTCTACCACG ATAAATCCAC TGTCATACAA GAAGCCCGCG TCTTCAACGA ATCGCCCATA TCTCCCAGGA AATGTAGGGC CCTCTTGACC CGGATCGTAT ACCTTCTATA CACAGGGGAG ACTTTCTCCA CTCAGGAGGC CACAACCCTT TTCTTTGGTG TTACGAAACT GTTCCAGCAC AAGGATGTGG GTGCCCTCCG ATTATCTGTT TCCGTCGAGC AACCAACTGA TCCCGTTGGG TAGAGTGCAC TAAGGCAAAT GGTCTATCTG GTCGTCAAAG AGCTGTCTAC TGTTGCAGAG GATGTAATCA TGGTAACATC TTCCATCATG AAGGACATGC AGCCCAATTT GGAAGTTGTG TACAGGCCTA ACGCCATCCG AGCTCTTGCT AGGATCATTG ATGTGAGTCA TCGAGCCATG TGCTAGAACT TCAACTAACA TCCAAGAAGG CGCAATCGGT TCAGTCTGTC GAACGTTTCT TCAAATCGGC CCTTGTGGAT CGCTCGCCTT CAATCTCTTC AGCCTCTCTC ATCTCCTCTT ACCACCTCTT CCCACTCTCC CCCACCATTA TCAAACGCTG GTCTAATGAA GCTCAAGAAG CTGTCAACGC AAAGTCTGTC TCTTCATACT CTGGCGCATC TGCATACTTT TCCGGTGGCT CAGCAGGAGG TTATCAGGCT GTTGCGAGTT CCAGCTACAT CATGCAGTAC CACGCATTGG GCCTATTATA TCTTATTAGA GAAAAGGATC GTATGGCGAT CACCAAGATG GTGCAACAAC TCGGTGCAAG CGGGAAGGGG AGCTCTATCG TGAGAAATCC CATGGCAATC TGCATGTTGA TTAGATTTGC GAGGAAGATT ATGGATGAGG ACCCCAAGTA CGTGCATCCT TGGTGTAGAA GTGTTGTGCC TGACAGTGTG CAGTCTCAGA AAGCAAATGC ACGAATATCT TGAGACTTTG CTTCGACACA AATCGGAAAT GGTCAACATT GAGGCCGCGC GAGCCATTTG TGAAACGAAA GATGTTCAAC CAGGCGACCT TTACAAGACT ATCGCGGGTA AGTCAGTAAT ATCATTTCAC TATCGAATCC TTTGACGAAC GCCATTGATA GTATTACAAT TATTCTTGAG CTCCCCTAAG CCTGTGATCA AGTTCGCCGC CGTGAAGACT TTAAGCAAGC TTGCGCAAAC TCTACCTCAA TCCGTTGCTG CGCTCAACGT CGAAATGGAG AACTTGATCA CCGATTCCAA CAGGAGCATC GCCACGTACG CTATCACCAC ATTGTTGAAG GTAGGTCTTT GTTTGGCGAT TTGATATTGT CGGGCGTCAG TTGACCATGG CACAGACTGG CAACGAAGCT TCTGTTGACA GGCTAATGAA GCAAATTTCG TCGTTCATGA CCGATATTAC AGACGAATTT AAGATCATCG TTGTTGATGC GATTCGATCA CTTTGCCTCA AGTTTCCAGC TAAGCAAGCG GTGATGCTCT CTTTTCTTTC TGGCGTGCTA AGGGACGAGG GCGGTTATGA ATTCAAGCAC GCGGTCGTTG AGGCGATTTT CGACATGATT AAATATATCC AAGACTCTCG CGATGCTGGT GAGTCTACTT CTTGACGAAT AGTAACTGAT GAAACAGCAC TCGCTCACCT TTGCGAGTTC ATTGAGGATT GCGAGTTCAC AAAGCTTTCT GTTCGTATAC TCCACTTGCT CGGTATTGAG GGGCCCAAGA CCCGGAACCC GACTAAGTTC ATCCGATACA TCTATAATCG CGTCGTTCTT GAAAATGCGG TTGTTCGCGC AGCTGCTGTC AGTAGCTTGG CGAAGTTTGG TGTCTGCGTC GATGACCCTT CAGTGATGAA GAGTGTCAAC GTGCTTATGA GGAGATGCCT TGATGATGTC GATGATGAGG TCAGAGACAG GGCTGCTATG TACATCAAGG TATTGGAGGA AAAATCTTTG GCAGATCTGC TTGTGAAGGA TGGTGAGTTG CAATAGCTCT CAAGTGACTC AACCTGATAT ATGACATAGA AGCTCAATTC TCCCTTGCCA ATCTCGAGGA ACAACTGATG TCGTACGTCC GAGATAATTC GAAGCACGCT TCGGCATTCG ACATCTCTGC GGTGCCTAAA GTCAGTCGCG AACAGGCCCA TGCAGAGATG GCTCAGACTC GCTCATCTGC TCTCGATGTC GCCGGCCCCT CTACTGCTGC TGTCATCACC CCAGCCTCCC CCATTCCATC TGCTAAGGAA GCCCAATCGT CGTATGCCGC TCAACTCTCG ACCATCCCCG AATTTGAGCC ATACGGTCCT GTCCTTAAAT CTTCTGCCAA GCCCATCGAG CTCACAGAAT CTGAGACAGA ATATGTCGTC ACGGCTGTCA AGCACGTCTT CAGGAAGCAT GTCGTGTTCC AATTCAATGT TGCCAACACC ATTCCCGACA CTGTGTTAGA ACAAGTCGCT GTTATCATGC AGCCATCGCC TGACTGTGGA TTGATAGAAG ATTTCATTAT TCCTATCAAT AGCCTGACAA CGCAAGTAGG CCAGGCACCG GTATATGTAA GCTTTACGAG AGAGAATCCA CAAGAATATG CGGCCGGATC ATTCGGTTGT ACTCTCAAAT TCGTCAGCAA AGAAGTCGAC CCATCCAATG GACAGCCGGA AGAAGAAGGA TATGATGATG AGTACCAGGT TGAGGAGCTC GACCTGGGCG CGGCCGATGT AAGTGTTTTT GTTGCTTTAT CATGTTCAGA TACTGATATC AATGATAGTA TATCACTCCT ACCTTCGTTA CTTTCGTGAA CGAATGGGAC AAGTTAGCAT CTTCCCCGTC ACTTACCGAA ACCTTCGCTC TATCTTCTTC CGAATCCCTT AGAGAGGCTT GTCGATCCCT TATTGAAGTC CTCGGTATGC TTCCCTTAGG TGGCACCGAC ACGCCTACCT CCAATTCTGT CCACACCCTT AATCTTGCTG GTCTTGCCAT CCCTATAGCA GATGGCGAAA AGTCAAGCAA GGTATTAGCC AGATGTAGGA TGACTTACGC TCCAGGTACT GGTGTAACAA TTGAGCTGAA TGTCAGAGCA GAAGAGGAGG AGGCGGCGCG GTTGATCATG GCTGCCATCT AATGCGGTCT TGAAAAAATA AATTGGATTT ACGCTAGTGT CCGTTGTACG ATGGTAACAA ATGGAAATG
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Protein sequence | MSFKKDDEAG GISFYHDKST VIQEARVFNE SPISPRKCRA LLTRIVYLLY TGETFSTQEA TTLFFGVTKL FQHKDSALRQ MVYLVVKELS TVAEDVIMVT SSIMKDMQPN LEVVYRPNAI RALARIIDAQ SVQSVERFFK SALVDRSPSI SSASLISSYH LFPLSPTIIK RWSNEAQEAV NAKSVSSYSG ASAYFSGGSA GGYQAVASSS YIMQYHALGL LYLIREKDRM AITKMVQQLG ASGKGSSIVR NPMAICMLIR FARKIMDEDP NLRKQMHEYL ETLLRHKSEM VNIEAARAIC ETKDVQPGDL YKTIAVLQLF LSSPKPVIKF AAVKTLSKLA QTLPQSVAAL NVEMENLITD SNRSIATYAI TTLLKTGNEA SVDRLMKQIS SFMTDITDEF KIIVVDAIRS LCLKFPAKQA VMLSFLSGVL RDEGGYEFKH AVVEAIFDMI KYIQDSRDAA LAHLCEFIED CEFTKLSVRI LHLLGIEGPK TRNPTKFIRY IYNRVVLENA VVRAAAVSSL AKFGVCVDDP SVMKSVNVLM RRCLDDVDDE VRDRAAMYIK VLEEKSLADL LVKDEAQFSL ANLEEQLMSY VRDNSKHASA FDISAVPKVS REQAHAEMAQ TRSSALDVAG PSTAAVITPA SPIPSAKEAQ SSYAAQLSTI PEFEPYGPVL KSSAKPIELT ESETEYVVTA VKHVFRKHVV FQFNVANTIP DTVLEQVAVI MQPSPDCGLI EDFIIPINSL TTQVGQAPVY VSFTRENPQE YAAGSFGCTL KFVSKEVDPS NGQPEEEGYD DEYQVEELDL GAADYITPTF VTFVNEWDKL ASSPSLTETF ALSSSESLRE ACRSLIEVLG MLPLGGTDTP TSNSVHTLNL AGLAIPIADG EKSSKVLARC RMTYAPGTGV TIELNVRAEE EEAARLIMAA I
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