Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND02840 |
Symbol | |
ID | 3256934 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 770611 |
End bp | 771994 |
Gene Length | 1384 bp |
Protein Length | 374 aa |
Translation table | |
GC content | 48% |
IMG OID | 638256218 |
Product | host-pathogen interaction-related protein, putative |
Protein accession | XP_570213 |
Protein GI | 58266114 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.674876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTTGT CCAAGCAACG GAAAGTTTTG ACCCTGGGTT AGCATCTGTT GATTTCTTCC GTTGCGCTTT CGCTGATGAA CAGAATAGAA CATTTCATCA TTGACACCTT CACTCGCCTT GGTAATGATG GCATTGAAAG ACCCATAGAG CAGCCCGATC AGGTATCCCT TCACCTTGAG CCTAGTCCAA TAGCTGACAC AGATGAAGAT AGGGGGAGGA GGTACCTACG GTATGTCCTG TCATCCAGGC CAGCCACACA TAAATTGTTT AGTAGTGCTG CACTGACGAC GCCATCATGA TATAGCGGTA ATCGGGGCGC GTGCATTCCT CCCACCCACC CAGCTGGGCA TGATTGTAGA CTACACACCT TCAACGTTTC CTCGAGCTCT CAAAGATGTA CTGGAGTCCT ATGGAAATGA GATGTGGGCT TTCAGAGAGA GAACTGACGG GCTTCCAACT GCAAGAGCAG TCAATCGGTA TGATGGCGAG ACAAGAGGGT ATGAACTATG TTAAGAATTT TAATCATGGG ATGATTTTTG CTGATGGCTG GGCATCATCT AGGTTCGAAT ACCTATGTCA GCCTGTTCTT CTTACACCGA ATTCTCTCAA AGGGACGCAG TTCGAAGACA TTGTGCCTTC TGTAATTCAT TTCATCTCTT ATCCGGCTCC CCGGGCTGGA ATAGTACTCG ATGAAATCAA CAATTTCAGA ACTTCCAAAG GATGGTCACC TCTCATCGTT TGGGAGCCAG AGGATGAGTC GTTGGAGGCA GTCACTTCCA TAGCGTCCCA TGTCGATATC TTGGGGTAAG TGTGGCACTT ACTTTGGAGG ACTGAGACTG ATGGTTAAGA GCAGACCAAA CCAGAACGAA GCGCTACGCC TTTACTCCCT CTTGACAGAT CCCACCTTCA CGGATGACGA TTTTAAAGCT GTTCTTACCA AAATTTGCCG CTCCCTAGCA TATTTGCGAC CTCGAATAGG TGCTGTCATC CGCGCAGGTC ATTTGGGTTG TTGTTATGCA TCCGCCGATC CAAGAGGGTA TCGACCAGAA GTAAAATGGA TCCCAGCCTA TTGGAACAAA GAGAGGGATG GCTATGAAGG AAAAGTAATA GATCCTACTG GAGCAGGCAA TGCATTCATG GGAGGAATAG CTGCCGCACT GTCGGAAGGA AAGAGTTTAG ATGAGGGTAA GCGGCCCAGT CCAGCTCCAA GTGAACATTG AGATATTGAC GATTTGGAAG CGGTGAGGTG GGGTAGTGTT GCTGCCTCTT TCGCCATTGA ACAGATTGGT CTTCCTCAAC TTACCAAGAC TGTGGACGGA CGGGAGCTCT GGAATGGGCA AAATCCACAG GAGAGGCTCA CAGCCATGTC CATGTGAGGG CAAT
|
Protein sequence | MTLSKQRKVL TLEHFIIDTF TRLGNDGIER PIEQPDQVSL HLEPSPIADT DEDRGRRYLR YVLSSRPATH KLFTVIGARA FLPPTQLGMI VDYTPSTFPR ALKDVLESYG NEMWAFRERT DGLPTARAVN RYDGETRGFE YLCQPVLLTP NSLKGTQFED IVPSVIHFIS YPAPRAGIVL DEINNFRTSK GWSPLIVWEP EDESLEAVTS IASHVDILGP NQNEALRLYS LLTDPTFTDD DFKAVLTKIC RSLAYLRPRI GAVIRAGHLG CCYASADPRG YRPEVKWIPA YWNKERDGYE GKVIDPTGAG NAFMGGIAAA LSEGKSLDEA VRWGSVAASF AIEQIGLPQL TKTVDGRELW NGQNPQERLT AMSM
|
| |