Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND01850 |
Symbol | |
ID | 3256967 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 499816 |
End bp | 500614 |
Gene Length | 799 bp |
Protein Length | 187 aa |
Translation table | |
GC content | 47% |
IMG OID | 638256120 |
Product | phosphoprotein phosphatase, putative |
Protein accession | XP_570244 |
Protein GI | 58266176 |
COG category | [K] Transcription |
COG ID | [COG5211] RNA polymerase II-interacting protein involved in transcription start site selection |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.168318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCCACA AGGTAGAAGA AGACCGTTAT TTTGTGTGGT TTGTGCGAGC AATAACGTGA GCATTGTTTT TCTCGTTTGT CCTCCCTGAC CAACAATCAC AGAATCGATC CATGGAAGCG CACTATGTCC TGAAGTGAGT AATTATGCCC ATTGATCTCT ACGATGCGCA GTTATTTATA TATCGCAGCA AAAACTCCTT CCGAGTCGTC TCCGCCGGAA CAGGCTCTGC TGTCCGTTTG CCGGGTCCGG CCATCGACAA GCCCAACGTC TATCGCTTTG GTACCCCGTA CGATGACATC TACAGAGACC TCGAGTCTCA GGACCCTCAG TTATACACTC GTAATGGTAT CCTGCCCATG TTGGATAGGA ACAGAAAAGT CAAAAAAGCG CCTGAAAAGT GGCAGGAGCT GAAGAGTGTA TTGGCGGATG TTGTCATTAC ATGTGAAGAA AGGTGTTACG ACGCTGTTTG CGATGGTATG GCTGTAATAA AAGTTTTAGC ACAACATTAC TGACTACGCT TTAGATCTCC TGACAAGAAG TGGAGAGTAT AACCGCCCAA TCCACATCAT CAACATTGAA ATCAAAGATA ACCCCGAAGA AGCTCATATT GCCGGCCAAT CCATACTGGA GCTCGCCAGA GCCGTAGGTT TGCTATCTCT CCATATCAGT GGAAGTCTGA GTCTGATTTT GCTGCAGATT GAAGCTTCAG ACGACCTTGA TTCTGATATT GATGCTATCC TCAACGCTCA CGGTGACAAG CACCCTCACA CGCTTTTGCA TACCGTAGGA TTCTATTAG
|
Protein sequence | MCHKVEEDRY FVWFVRAITK NSFRVVSAGT GSAVRLPGPA IDKPNVYRFG TPYDDIYRDL ESQDPQLYTR NGILPMLDRN RKVKKAPEKW QELKSVLADV VITCEERCYD AVCDDLLTRS GEYNRPIHII NIEIKDNPEE AHIAGQSILE LARAIEASDD LDSDIDAILN AHGDKHPHTL LHTVGFY
|
| |