Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CND00380 |
Symbol | |
ID | 3257323 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006686 |
Strand | + |
Start bp | 110372 |
End bp | 113011 |
Gene Length | 2640 bp |
Protein Length | 623 aa |
Translation table | |
GC content | 47% |
IMG OID | 638255975 |
Product | glucosidase, putative |
Protein accession | XP_570382 |
Protein GI | 58266452 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.416294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCTTCTTCC TTCTTTTGGT CCGTGCACAT TTCGCTGCGT TAGCAACATT ACTCCCTTTC ATTCGCAAAT GCGATCCTCT CAACGACAGG GCCGCGAACC TTTACTCCAA TCCGCCGAGA ACCCAGGTCA ATCCCAGCGC CTCTCCGACT CGAGCTTTAC CTCTTTCGAC CACCCAGGTA TGTCCCATCG CGGATCTCAT AACGATGCCA GCGTGAACTC GTACGGCTCC TCTTCATCCA ACAGATTCGG GCCAACGGCT TCTCTTGCCA GTGCCAATTC AGCAGCTGTT GTGGCCGGCA ACACTGGGGG CTTCTCAGAT GAACTTCCTC GGCAAGCCTC ACCACAAGCC CAAATGGGAA ACTGGCATGA TGTCGATGAC CTCGATGATC ATCTGCATAC CTTCACATCG CAGGATCACA AAGATCTTGG TTCACCATTC GACATTACCT CTGTGCGTGG CTGGGCAAAT GCTCTTACCC TTGGTATACT CGCCGGTGGA GGTGTCATGT TGTTTGCCGG ATATCCTATC ATCTCGTTTT ATTATGGCGA CAGCAACTCT TCCGGTGCCA ATACCTCTGG TTATAACCTG GGAGGAATCA ACTCTAGTGG CCAGTACCCG GAGATACCAG GCCTGCCCAC CTTGATTGAT GCGGACACTC CAGAATGGGC TTACAAGAGA ACCGGGTTTG ACGGGGATGA ATGGACGTTG GTGTTTTCAG ACGAGTTCAA CAAGGATGGA AGGACCTTCT TTGAAGGAGA TGATCCCTTT TGGACTGGCA TGGATATTCA CTATTGGCCC ACTGGGTGAG TCTCAGACCG CAATCGGATC CAGCTGACAG AGTAGAGATT TCGAATGGCT TGATCCCTCT GCTGTGACAA CGGCCGACGG TCATTTGGTC ATCACCATGA CACAAGAACC CATCCACGAT CTCAACTTCA AGTCTGGCAT GCTCCAAACC TGGAATAAGC TTTGCTTCAA TAAACATGCT TACTTTGAGT TTTCGGCAAG TATGCCTGGT CAGACGATGA ACGGTGGGTT TTGGCCTGGT ATCTGGACTA TGGGGAATTT GGGTAGACCA GGATACGGTG CCTCCACCGA AGGGATGTGG CCGTAAGTTC CTTTTTCCTA TGCGAAGATG GAGCATAACT GATATAGATT CAGATACACC TACGACAGTT GCGACGTTGG TACCCTCCCC AATCAGACAT ACGTGAACGG CACCGGTCCT ATTGCGACAC TTACCACCGG CGCTGACGAT TCACCTCTTT CCTACCTCCC CGGCCAACGA TGTTCCGCCT GCACTTGTCC TGGAGAAGAC CACCCCGGTC CTGTGCATAC CAAAGGCCGT GCAGCCCCGG AAATTGATAT CGTCGAAGCG CAAATCATTA TCTCCGAGTC CAGAGGAGAA GTGTCTCAAT CTTTCCAAGT AGCTCCTTAT GATGATTACT ATCAGTCTGA TAATTCGTCC AAGAACTTTA AGCATTACGA CACTGATTTA ACGTATTGGA ATACGTATTT GGGTGGTCAT TTCCAGCAGG CGGTATCGAG TTTGACGAGA CTTCCAAGAA ATATATACTG GGATCAGCCG GGAGATAGTA AGCAATTTAC AGTGTTTGCT ATGGAGTAAG TTTTTTTTTC CAATATGGAA GGAAACGAAA TCTGATAATC TTGCAGATAT CAAGCCTTCC CAGAGGCAAG AGACCAGGGA TATATCACTT GGTGGGCAGA TAACAAGACT AGCTGGACAA TGTACGCGGA TGCAGTTGCA GAGAATCCCA GGACTGGTAT CGGAAGAAGA ATTATCCCAG AGGAACCTAT GGCTATGGTG AGTCGAATAG AGAAAAAGAG CAGGGATGTG TGCGCTGACC TATTACACTG GGGTAGATTG TCAATTTGCA TATGGTACGC TTCTTTACTC TCTTCTCCTC CATTCGCTCT GAGATTCATA GAGTCATACT GATTTTGGCC GTCTGTAGTC AAACAACTTC CAAGCAGTCG ATTTTGCGAA TTTGAAATGG CCAAACTACT TTAGGATTGA TTATGTGAGA GTGTATCAAA AACCAGACCA AATCTCTATC GGATGCGATC CCGAAGGTCA GTCCCTAATC TTTTCTACAA CAAAAGGTTA TTGTAACGTA GAAGAAGAAC TGACTTTGTT TTGATATGAA TAGATTATCC CACTGCGGAC TATATCGCGC GACATGCAGA GGTATATTCC AATCCAAATC TCACAACCTG GGGAGCAGCT GGTAAGTCGT TCTTGCCTTG TCGCTGAGTG TTTTGTACAA TCGCTGACAT TGTCTTTTCT TTAGGATATA CTTTCCCAAA AAGTAGTATG AAGGGTGATT GCTAAATGGA CATTCTGTGT AAAAGGGATC TTGAAAGGTT GGTTAAAGTT GGTAAGGAGG AAAACAGTAT CATTGATACG CGAGAGCAAC CAGTGATGAG GGATATGGAG GGGGGGGTAG GGGGAAGGAA AGTTGGACAA TGTGTATACC TAGCAACCAT AGAAAAACTG CACTGGACTG ACCAGACGGA CTTACGATTT TTTTGCATTT TTTACGATAC CAATTGCAGT AGTGGAATGA TCCATATCCG CGTACATACG TTCATACGTT CTTTGACAGA AAACAGATTA
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Protein sequence | MRSSQRQGRE PLLQSAENPG QSQRLSDSSF TSFDHPGMSH RGSHNDASVN SYGSSSSNRF GPTASLASAN SAAVVAGNTG GFSDELPRQA SPQAQMGNWH DVDDLDDHLH TFTSQDHKDL GSPFDITSVR GWANALTLGI LAGGGVMLFA GYPIISFYYG DSNSSGANTS GYNLGGINSS GQYPEIPGLP TLIDADTPEW AYKRTGFDGD EWTLVFSDEF NKDGRTFFEG DDPFWTGMDI HYWPTGDFEW LDPSAVTTAD GHLVITMTQE PIHDLNFKSG MLQTWNKLCF NKHAYFEFSA SMPGQTMNGG FWPGIWTMGN LGRPGYGAST EGMWPYTYDS CDVGTLPNQT YVNGTGPIAT LTTGADDSPL SYLPGQRCSA CTCPGEDHPG PVHTKGRAAP EIDIVEAQII ISESRGEVSQ SFQVAPYDDY YQSDNSSKNF KHYDTDLTYW NTYLGGHFQQ AVSSLTRLPR NIYWDQPGDS KQFTVFAMEY QAFPEARDQG YITWWADNKT SWTMYADAVA ENPRTGIGRR IIPEEPMAMI VNLHMSNNFQ AVDFANLKWP NYFRIDYVRV YQKPDQISIG CDPEDYPTAD YIARHAEVYS NPNLTTWGAA GYTFPKSSMK GDC
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