| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNC05970 |
|---|
| Symbol | |
|---|
| ID | 3256408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006685 |
|---|
| Strand | - |
|---|
| Start bp | 1762241 |
|---|
| End bp | 1766404 |
|---|
| Gene Length | 4164 bp |
|---|
| Protein Length | 1137 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | 638255818 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | XP_569981 |
|---|
| Protein GI | 58265650 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC CCAGCAGCCC CCCGGCCGTA CCCTACAAAG CCTATGTGCC CCGCAGACAA
CGGTCCATCC GCCCAGACCG GCCCCTCCCG CCTCCACCCC CAGAAGAAGA CGTCCCCGCC
GTCAATGCCT TCGAACGCAT ACAAGGATAC ACTTCTCCCC CTTCTCCGCC GCCCCGCGTC
TCGTCCCCCA GGCTGGCGGA GAAAAAGCTT CCATCGCCGC CGAGCACCGC TCCGGTACAG
CATGTCGACC AGCAGCGCCA ACGTGCGTCG TCGTCGTCGT CGTCGTCGTC GGCGACCGTG
CCTCCACCAA ATGCTGCTCC GCTCCTAGAC TCGGCGAGCA AAGCCCAGAC CCAAACCTCG
GCGGCCCACC TGCACCCGTA CCACTCCACC CTCCCCACGT CGTCCGACCC TCCTACGGTG
CTCACTCCCC TTCGAGCGCA TTACCTAAAA AAGACGCTGG TCAGTCTTCA GGTCTCACAT
GAATTGGCCT TGATAACCGA CCCTGTGCTG GGCGCCAACG CCCTCGGCCT CCTGGGCGAG
CCGTTTGTAC TGCCTCAGCA AGCGAGGAAG GAAGCGCTCC AGCGTGTTAG TGAAATTGCC
CGTGCGGAAG GGCAAGTAGG GGATCTACCG TTCTTGAGGT TCATGTTCCA TCAGTTCCTC
TTACCCTTTC CCTTTCTCAC CGCCGCTCCG CCCGCGTTCT GGTCCGCCAA AGTTCAACCC
TTTTTGTCAT CATTCTTGTC CACGACAGGT ATATCTGCTC ATGCTACTCA GACAGAGCAG
GAAAGAGAGG TTACAGAGAG CTTGATGTCA AAGGACGAGC TGAAAGAGGC CCAGGAAAGA
AGAAAACTTT GGGTAAAGGT CGAGAAGCAT CTGGCGCTGA TGTTTGGCCT CGGGATTAAG
CTTACGAATG GTGAAGAGGT AGTGAGGATT GGTCAGGCAG AGCTGAAAAG ATTGGAGGCT
CTACAGGAGG AAAGGAAGCG GAAATGGATG GAGAAGCATG GTGGTCGACA ACCTGGTGAA
GCTCATATGA CTGGCTTTGA GGTGAATGTC ATTGGCGTGA GGCTTGTAGT GGAAAAAGGA
AGGGTCAGAA ATCGGAGCCA TGAGGTAAAT TTCCGACTGG GTCAAGTGTA TGCTGTGCGA
GGTAGGGCTG ACAACGTGTG CTAGGAATTC ATCATCCGTA CAAGCAGACA TGGTGTATCA
GACGTATTCG TATCCAGACG ATACGGCGAT TTCAGAAGGC TTGCAGAAGA AGTGAGGCAT
CTTTGCTCCT ATCCAATTTT GCAATCCCAT CTGATCCGGA ATAGCTGCGC CTCGCGTTCC
CCGACTCTAT GATCCCCTTC CCTCCTCCCA AAGACAAATC CACTACGGCT GCGCCTCCCA
TACCCTCCAC CTCTACCGTC TACGGCACAT ACAACCCCCT TCGCGCCATA TACGGCTCTG
GAGCTCAGCC TACCCCTGCC GACTCCACTT CATCCCTACA AGACCCCGAT TCGCCCACCA
CTGCGACTAC TTCGGGAACA CCACTTTCGA GGGAGAAGAA CCGCCTTACT CTAAGAGCGT
ACTTGAACAG CCTGCTCACT CTGCCGTACG TGATAGAATC TCCCATCTTG CGTTCCTTCC
TCCTCTCAGC ACCCACCGCA CTCACCCCGC CCGAGGCCGT GGACTGTCAG CGTAGGCTGG
AGGCAGATGC GGTGAGGGAA GAAGGGAGGA GGAGGTTCAG GTTGGAGGCA GAGAAGAGGA
TTGAGGCGCT AAGAGAAGGT CTGGCGACGT TTAAAGGCGA TGTATTGAGT AAAGAGGGGG
GACTAAAGAA TGTGTTTGAG GTGGTGAAAA GGGTGGAAAA GGTGGAGGAT CTCCCAGAGG
CTGAGGCTAG TGTCTTGGAG TGGGGAAGGA TATCGTGAGT GATTACCATC TACAAAGCAT
AAAGGAAAAT GACTAATGAA AGTTTGCAGG TTCGCCGCTA CAATCTTCCA ACTGTTTGTA
GCTTCCGATA CCGCATCAGA TACTCTCGCC TCACTCAAGC GGCTCCACGG CCTCATGCCA
TACTTTGTGC TCAAAGGTAT CCTCAAAATA TCCAATCCAA TGGCCATGAT CCGCGGCGTT
CTAGACCTCT TCCTCGCACG ACCATTCGGA GGGCAATCAT TGATACAGCG AATGTTCTCC
TCCTCGCTCA CAGAGGATCT AAGGATGCTG GATGAGGATA TTGAGGTCGT GCAGGATAAG
ATTGATGACC CCGTGCTGTG TCAGAAGATT GAACAGTATG CGAAAGCGCC GTTTGAAATT
CAAGAAATGT TTAGAAAAGA TGCTGGTAAG CATTCCCTTT TCTTGGCTTG TTTAACCTTA
TCGCCCGATC CCATTGATGA CTGACTTTTT TAATTCTAAT AGCATCCGAG GGCCTCGACC
TACTCATCAT CATCCTTCGC TCTCCCGATG TCCCATCCCT TTCCCGTCCC CAATTCCAAC
GTGTCGTTAA AGCTACAAGG GCATACAGGG AGTACAAATC TTCCCTTACC GACTTGTCTG
ATTCCGATGA TGATGAAGGA CCGGAAAATG AGGATGCGTG GTTGTATGAG GATTTAACGA
TTCTGTTGAA ACTCTGGATG AGAAAGAGGG AGAAAGAAGG TTTGCTCGCT CTGATATTTG
AAGTGAGTTG TCATTTAGTC TTTGGGTTCC TTTGGTTTTT TTAATCTACC TGGCAAGGAT
GGGGGTACTG ACGACAGGGC AATTTTTTTA TTTTTTATAG GGAGTGACAG CGGAACTGCT
CAAGGATATC ATCACGATTT TCTACACCCC TCTGGCACAG GTGTATAAGG CTGCAAGCAT
TGCCGATTCT CTTGGTGATA TGCAGGCTTT TATCAATGAT ATGATCCGGA CCGTCGAGCA
GGTCGAAGAA CGTGAGTATC CGATTTTTTA TTTTTTATTT GCTTCTTTGC GGCTTATTGA
AGAGTGGTTT GTGCTTATCC CTCCGTCGTG CATCCAATTA GTCTCCCAAG AAGATCCTCA
ACGAACTGTC CAGACATTCA TCGATCTCGT TCAGCGCCAC GAACAGTCAT TCTACACATT
CGTCCATAAC GTTCATTCCA AGGGCAAGGG ATTATTTGAC TCTCTCATGT CGTGGCTCGA
GCTTTTCCTC AATTACGCTC GTTCCGGTTT ACCATCCCCT ATCGATCTCG AATTCATCCT
CCCGCACTCG GAGGAAGAAC GTCGAAAAGT GCTGGCAGAG GTCGATAGCG TCGCGACGTA
CCATTACCGA CTCAAGGTCG CGCACGAAGA AAAGATTCGA CGACGGTTCC GCGCAGCTGC
AACGGATAAT GGCGGAGCGG GGGGAATAGG CGATCCGATT GATGATGAAG CCGAGTTGTT
GAGCTCTGTT ATGGCGAGCT TGAATATAGG CGAGACGACG ATGGATGAAG CGGGTGATTT
GGCAGATGAA GAATCAGAGG AGGAAGCAGA AGATGAAGAG GAAGAAGAAG AGGAGAGACA
GTTGGCGAAT TTGGAGGAAG GGGATGAAGA TAAGAGTGAT ACGAGCTCGA TGAACCTCGC
CAGCCCGAAA CAAGAGGCGC TTTCTCCACC GTCTGGTAGC GCTGGCTCTG GTAACAGTAC
GGCCGATCGA AGACGGAGCT CGCATTCTTC TACTTCTCAA TCCCTCAAGA AAGTGCGATC
GGCTTTCAAG TTTAAACATG GTGACGATAA AAAATCGAGC CCGACCGCAG TTGCAGGTGG
AACTGACGAA GGAAAACAAT CTTCGCCGCT GGCACAAGGA GGGCGGCATC ATGTCCATGG
TCATGGGAAT GGGAGAAGGA AGAAGATGGG TGGTATAGTA ACGTTGACAC CCCCGGAGAC
AGAGTCGATA GCTACTCTAA GGCCATTGTT CGTCGAAGCT GTAAGTGATC TTTCCTTACT
TTTGTCGTAG TGTCGGGCTT TCGTTCGGCT CTGGAAAAAA CGAAAGCTGA CTGAATAATC
TTTTTCTGTG CCACAGCTTC GTCCTAGTCT GATAGTTCAA CCTATGAAAT AAAGGTACTT
GTGATGGGAT GCTCCCTGGA TTTCGATAAC TCCAATTCAT CAGACCTTCA TCTTGTTGAG
AACAATCAGT TTGGAAATAT CCTTCATCAA TTGTATATAT CTCCTTGGTG TAAAGCGTGC
CCTTTTCAAT CTCTCGTCCA TATG
|
|---|
| Protein sequence | MSDPSSPPAV PYKAYVPRRQ RSIRPDRPLP PPPPEEDVPA VNAFERIQGY TSPPSPPPRV
SSPRLAEKKL PSPPSTAPVQ HVDQQRQRAS SSSSSSSATV PPPNAAPLLD SASKAQTQTS
AAHLHPYHST LPTSSDPPTV LTPLRAHYLK KTLVSLQVSH ELALITDPVL GANALGLLGE
PFVLPQQARK EALQRVSEIA RAEGQVGDLP FLRFMFHQFL LPFPFLTAAP PAFWSAKVQP
FLSSFLSTTG ISAHATQTEQ EREVTESLMS KDELKEAQER RKLWVKVEKH LALMFGLGIK
LTNGEEVVRI GQAELKRLEA LQEERKRKWM EKHGGRQPGE AHMTGFEVNV IGVRLVVEKG
RLRLAFPDSM IPFPPPKDKS TTAAPPIPST STVYGTYNPL RAIYGSGAQP TPADSTSSLQ
DPDSPTTATT SGTPLSREKN RLTLRAYLNS LLTLPYVIES PILRSFLLSA PTALTPPEAV
DCQRRLEADA VREEGRRRFR LEAEKRIEAL REGLATFKGD VLSKEGGLKN VFEVVKRVEK
VEDLPEAEAS VLEWGRISFA ATIFQLFVAS DTASDTLASL KRLHGLMPYF VLKGILKISN
PMAMIRGVLD LFLARPFGGQ SLIQRMFSSS LTEDLRMLDE DIEVVQDKID DPVLCQKIEQ
YAKAPFEIQE MFRKDAASEG LDLLIIILRS PDVPSLSRPQ FQRVVKATRA YREYKSSLTD
LSDSDDDEGP ENEDAWLYED LTILLKLWMR KREKEGLLAL IFEGVTAELL KDIITIFYTP
LAQVYKAASI ADSLGDMQAF INDMIRTVEQ VEEQWFVLIP PSCIQLVSQE DPQRTVQTFI
DLVQRHEQSF YTFVHNVHSK GKGLFDSLMS WLELFLNYAR SGLPSPIDLE FILPHSEEER
RKVLAEVDSV ATYHYRLKVA HEEKIRRRFR AAATDNGGAG GIGDPIDDEA ELLSSVMASL
NIGETTMDEA GDLADEESEE EAEDEEEEEE ERQLANLEEG DEDKSDTSSM NLASPKQEAL
SPPSGSAGSG NSTADRRRSS HSSTSQSLKK VRSAFKFKHG DDKKSSPTAV AGGTDEGKQS
SPLAQGGRHH VHGHGNGRRK KMGGIVTLTP PETESIATLR PLFVEALRPS LIVQPMK
|
|---|
| |