Gene CNC05790 details

Gene Information

• Locus tag: CNC05790
• ID: 3256663
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Cryptococcus neoformans var. neoformans JEC21
• Kingdom: Eukaryota
• Replicon accession: NC_006685
• Strand: +
• Start bp: 1715137
• End bp: 1717230
• Gene Length: 2094 bp
• Protein Length: 493 aa
• GC content: 47%
• IMG OID: 638255800
• Product: conserved hypothetical protein
• Protein accession: XP_569800
• Protein GI: 58265288
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1607] Acyl-CoA hydrolase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.747278
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCTCTAGTA TATCAAGGGC AACGCAGGCA ACGAAACGGG CATATTTTTC TGTAAACAAG 
TCATCTCCTA AGAAGCCATA ATGTCCTTAG CATTCAAAAC CATTCTCAGG GCTGGCATAC 
CTAGAAGGAG CTTCGCCTTG GCGAGGTTCA ACTCTAGTGC GGCTCGTAAG ACACCGTCTA 
GCCCTATTCA GCAGCTTTAT GATCTGCGAG AGATAGATCG CCTGACTACT TCTGTGGGAA 
GTGAGTATTC TCTTGTTGTA GGAGACATGC ATGGATTGCT AACGACTGCT CTGTCAGAAT 
CTTCTACCGG CGGGAACCAC CCCTCTCCCC TGCTCATGCG CGCTCTCCCG GCTCCTTGGC 
TCTCGTCTTC TTCCCCCGAC CTTGAATCTC AAGCATCCAA AGATGATTCC CCAGATCATC 
AATGCGATGA GCATGAGGCT GCACCTCTGG GTCCTAGGCA TATGAGCGAA AGTTTTACTA 
GCTTTGATCT GCCTTTGGCC AGCGATGCCG CTTTGTTTGA TCGTTATGTG AATACTTCAG 
GAGGTTTCAG TAAGTACTGT CCAGCCTTTA ACAGTAGAAG CTGTAATGCT GATTGTATTC 
ATATTAGGGA TGGGAAAGCT TCTTGAGCGT AAGTTACTCT GCATAGAGTA CTGATGAGAC 
ATCAAACTGA CATCGCCTTT GAACATAGAC CTCGATTCTC TTGCAGGCGC CGTTGCCTAC 
AGGCACTGTC TTCCACCTCC CAAAAGCGGA GCCAGCACTG CCGCTGCATT CCATGATGCC 
TCTTCGAGGG CTGGTCTCTA TCTCGCTACA GCAAGTGCGG ATAGGCTTGA CATGTTCGGG 
CGACTGAACA AGGACAATGT GCGGTAAGTC GACCTCAGCA GCTATTCCTG TTATTTGTCT 
AAGGTATTTA CAAATGGCAC TTCAGTGATC TGAAGTTCTC CGGCTTTGTC ACATGGACAG 
GTAATTCCAG TATGGAGGTA GTCGTTAAAA TGGAAGGATC TCGTCCCGAT ACTGTCGACT 
GGGAAACATT GATGCTAGGC CGATTTGCCA TGGTGTGCCG AGACTCTAAG ACACACAAGT 
CAAGGAAAAT ACCCCCATTA ATTGTTGAGT CAGAGGAAGA GAAAATTCTC TGGGCCATTG 
GCGATGAGCA TCAGAAAAGA AGAAAGGCTA GCGCCATGAA CGCTTTGGAT AAGGTCCCAG 
TGAGTAGACG TAAATTGTTT CAATAACATT AATATCTAAC TTCACATTAA GCCATCATCC 
GAGGAGGCCA AAGAACTTCA CGAGCTTATG CTCAAGGTCC AAGAAGCTAA AGATGGCAAG 
ATCAACGGAC AAGAGATTGT GGAGATGAAA GATACTAAGG TCGGTCAATC GCAAGTGATT 
TAGGCGAGAG TGATTAATCT TTCATTGCAG ATTGAGACTG TTCAGCTTAT GCACCCTCAA 
GACAGAAACT TGCACGGGAA GGTCTTTGGT GGCATTTTAA TGAGACTTGT TCGTTTGCGC 
CTAGCTTTCC TTTTGATAAT GTTGCTGACT ATAATTCGTA GGCATTGTGA GTTTCCGTAA 
GATTGATACG CTGCAGTGCA ATACGACTAA TCGGCAATAG TGAGCTCTGC TTCACGAATG 
CTTCCCTTTT CGCCCAAGGT CCTTTGCGAT TTTTGGCCCT TGACCAAATC ACCTTCCGAC 
TGCCAGTACC CATTGGTGCC GTGCTTCGAC TGTCTTCTAA GATTGTGCAC ACAACCCGGC 
CACACGAGGG ACCAGATGGA GAAGCAAAAG TGCATGTCAT GGTGAAAGCT GAGGTTGAAG 
AGGTTGAGAC TGGGGTGAGT CAGATTCACA TTTGTGTTAG GGGCCTTGTT GACTAGTGTC 
GTGGTAGTCT CGACGGGAAA CCAATACATT TTTCTTCACC ATGGCAAAGG GGGGTCGACA 
GCCTCTCGGG AGAACAGTTG TCCCTACCAC GTATAATGAT GCGATGTTTT ATTTAGAAGG 
CAAGAGAAGA GTGCAAGTTG GAGACGAAAT GAGGAAATTG TATCTGGGTG AAAGGGCAGG 
CGCAGTTGGA GACGCTAATT AAGGGGGTTG GTTTTTCGGG TTCTTATGCA TGTA 

 

Protein sequence

MSLAFKTILR AGIPRRSFAL ARFNSSAARK TPSSPIQQLY DLREIDRLTT SVGKSSTGGN 
HPSPLLMRAL PAPWLSSSSP DLESQASKDD SPDHQCDEHE AAPLGPRHMS ESFTSFDLPL 
ASDAALFDRY VNTSGGFRMG KLLEHLDSLA GAVAYRHCLP PPKSGASTAA AFHDASSRAG 
LYLATASADR LDMFGRLNKD NVRDLKFSGF VTWTGNSSME VVVKMEGSRP DTVDWETLML 
GRFAMVCRDS KTHKSRKIPP LIVESEEEKI LWAIGDEHQK RRKASAMNAL DKVPPSSEEA 
KELHELMLKV QEAKDGKING QEIVEMKDTK IETVQLMHPQ DRNLHGKVFG GILMRLAFEL 
CFTNASLFAQ GPLRFLALDQ ITFRLPVPIG AVLRLSSKIV HTTRPHEGPD GEAKVHVMVK 
AEVEEVETGS RRETNTFFFT MAKGGRQPLG RTVVPTTYND AMFYLEGKRR VQVGDEMRKL 
YLGERAGAVG DAN